SRR1526296_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526296_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	74178
Sequences flagged as poor quality	0
Sequence length	56
%GC	54

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CCATCTGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAACGATTAAG	319	0.4300466445576856	No Hit
CCATCTGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAG	256	0.3451158025290517	No Hit
CCATCTGGGTACCTGGTTGATCCTGCCAGTAGCATATGCCTGTCTCAAAGATTAAG	231	0.311413087438324	No Hit
CCATCTGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTCGTCTCAAAGATTAAG	178	0.23996333144598128	No Hit
CCATCTGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCCCCCGACTGCTCTTCC	143	0.1927795303189625	No Hit
CCATCTGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCC	124	0.16716546685000944	No Hit
CCATCTGGGTACCTGGTTGATCCTGCCAGTAGCATATGCCCGTCTCAAAGATTAAG	123	0.16581735824638033	No Hit
CCATCTGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGCCTCAACGATTAAG	95	0.1280703173447653	No Hit
CCATCTGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTCCTCTTCC	90	0.12132977432661976	No Hit
CCATCTGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTC	88	0.11863355711936154	No Hit
CCATCTGGGGCCGAATAGCCTCTCCACCCAAGCGGCCGGCCAACCTGCGTGCAATC	88	0.11863355711936154	No Hit
CCATCTGGGGATCCCCTCGACCACTCCTTTGGCGCTTCGCTGTCGACCGTGCGCTT	76	0.10245625387581224	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CCACCAA	15	0.008140809	50.397682	40
ACAAACC	15	0.008162802	50.363327	38
GCTCATA	15	0.008162802	50.363327	41
AACAACA	15	0.008251217	50.226376	42
CGATTAA	60	0.0	50.226376	49
GCCAGCT	15	0.008251217	50.226376	42
GTCTCCA	25	2.0137606E-5	50.22637	42
GTGCGCT	25	2.0137606E-5	50.22637	49
ACAACAC	15	0.008273432	50.192253	43
CTCCACG	30	1.0074236E-6	50.192253	44
CCGACAC	20	4.080227E-4	50.192253	43
CAACGAT	50	7.2759576E-12	50.15818	46
GTCCTCA	25	2.0300373E-5	50.15818	46
TATATTT	15	0.008295691	50.15818	46
CACGATT	30	1.0121621E-6	50.15818	47
TTATATT	15	0.008295691	50.15818	45
ACGATTA	60	0.0	50.15818	48
AACGATT	50	7.2759576E-12	50.15818	47
TTGAAAC	15	0.008295691	50.15818	48
CCACGAT	20	4.0939398E-4	50.158176	46