SRR1526294_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526294_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	18663
Sequences flagged as poor quality	0
Sequence length	56
%GC	50

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ATCTCTGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCCCTTGCCTAGCAAGCGC	57	0.30541713550876065	No Hit
ATCTCTGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGC	53	0.2839843540695494	No Hit
ATCTCTGGGGCCGAATAGCCTCTCCACCCAAGCGGCCGGCCAACCTGCGTGCAATC	33	0.176820446873493	No Hit
ATCTCTGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCCCCCGACTGCTCTTCC	27	0.14467127471467608	No Hit
ATCTCTGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCC	27	0.14467127471467608	No Hit
ATCTCTGGGGCCGAATAGCCTCTCCACCCAAGCGGCCGGCGAACCTGCGTGCAATC	22	0.117880297915662	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGCTTGC	15	0.007973676	50.51087	39
GCAGCAT	15	0.007973676	50.51087	42
CTTGCCT	20	3.877195E-4	50.510868	41
TTGCCTA	20	3.877195E-4	50.510868	42
CCGCTGC	15	0.008060019	50.373985	43
AGACCAC	15	0.008060019	50.373985	37
CGCTGCA	15	0.008147057	50.23784	44
CGACAAG	15	0.008147057	50.23784	49
GACAGTG	15	0.008323228	49.967743	9
CGCCTGG	15	0.008323228	49.967743	34
TGCTGTG	15	0.008323228	49.967743	13
GGACATG	15	0.008323228	49.967743	8
GGACAGT	20	4.0908187E-4	49.967743	8
CTGGTGA	20	4.0908187E-4	49.967743	13
GTCCTTT	15	0.008323228	49.967743	9
GCTGTGC	15	0.008323228	49.967743	14
GGCTTTT	15	0.008323228	49.967743	9
GTCTTAA	30	9.972828E-7	49.967743	13
GGAAGTG	20	4.0908187E-4	49.967743	8
TGGTGAG	20	4.0908187E-4	49.967743	14