SRR1526293_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526293_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	32536
Sequences flagged as poor quality	0
Sequence length	56
%GC	52

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ATGGCGGGGGATCCCCTCGACCACTCCTTTGGCGCTTCGCCGTCGACCGTGCGCTT	60	0.1844111138431276	No Hit
ATGGCGGGGACACGCAGGGATGAGATGGGCAAAAAAAAACCAAAAAAAAAAAAAAA	49	0.15060240963855423	No Hit
ATGGCGGGGGATCCCCTCGACCACTCCTTTGGCGCTTCGCTGTCGACCGTGCGCTT	48	0.14752889107450207	No Hit
ATGGCGGGGGCCGAATAGCCTCTCCACCCAAGCGGCCGGCCAACCTGCGTGCAATC	44	0.13523481681829358	No Hit
ATGGCGGGGACACGCAGGGATGAGATGGCCAAAAAAAAACCAAAAAAAAAAAAAAA	43	0.13216129825424147	No Hit
ATGGCGGGGGATCCCCTCGACCACTCCTTTGGCGCTTCGCTGTCGACCCTGCGCTT	41	0.1260142611261372	No Hit
ATGGCGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCCCCCGACTGCTCTTCC	35	0.10757314974182443	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACAACCA	15	0.0079432335	50.645767	39
TTCATTT	15	0.007992677	50.56651	38
ACAAACC	20	3.8997046E-4	50.56651	38
CAACCTG	15	0.007992677	50.56651	41
CAACACA	35	4.82014E-8	50.330215	44
CACGTGG	20	4.0220353E-4	50.25195	43
CGTGGCT	20	4.0220353E-4	50.25195	45
TCACGTG	20	4.0220353E-4	50.25195	42
AGACTCT	20	4.0220353E-4	50.25195	37
TGGCTGA	20	4.0220353E-4	50.25195	47
ACAAAAC	30	9.815249E-7	50.251945	48
CTGAGTC	50	5.456968E-12	50.251945	49
ATCTCCA	15	0.008192744	50.251945	45
GTTCTGA	50	5.456968E-12	50.251945	46
CCCACAC	15	0.008192744	50.251945	43
CCCGTCG	15	0.008192744	50.251945	42
CCCAACA	15	0.008192744	50.251945	43
CCCCAAC	15	0.008192744	50.251945	42
AGTTCTG	50	5.456968E-12	50.251945	45
ACAACAC	15	0.008192744	50.251945	43