SRR1526292_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526292_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	70353
Sequences flagged as poor quality	0
Sequence length	56
%GC	56

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CCGACGGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCCCTTGCCTAGCAAGCGC	281	0.3994143817605504	No Hit
CCGACGGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGC	206	0.29280911972481627	No Hit
CCGACGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCCCCCGACTGCTCTTCC	123	0.1748326297386039	No Hit
CCGACGGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAACGATTAAG	119	0.16914701576336474	No Hit
CCGACGGGGTACCTGGTTGATCCTGCCAGTAGCATATGCCTGTCTCAAAGATTAAG	99	0.140718945887169	No Hit
CCGACGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCC	89	0.1265049109490711	No Hit
CCGACGGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAG	81	0.1151336829985928	No Hit
CCGACGGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTCCCTACCAAGCGC	75	0.10660526203573409	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AGCCGCT	15	0.008167848	50.35273	41
CGATTAA	35	5.0549716E-8	50.172516	49
AAGTGCC	15	0.008284548	50.172512	34
TACCAAG	25	2.0341276E-5	50.136627	47
CAACGAT	40	2.557499E-9	50.136627	46
AACGATT	40	2.557499E-9	50.136627	47
CCGACCG	25	2.0341276E-5	50.136627	44
CTACACG	15	0.008308036	50.136623	46
CGACTCC	15	0.008308036	50.136623	44
CTCTCAC	15	0.008308036	50.136623	47
GCCCGCG	15	0.008308036	50.136623	46
TCGCCTA	25	2.0427646E-5	50.10079	42
ACCTATT	15	0.008331574	50.10079	42
TTAGTTG	15	0.008331574	50.10079	42
TGTAGCG	15	0.008331574	50.10079	42
CACAATT	15	0.008331574	50.10079	42
CGCCTAG	20	4.1302538E-4	50.065	43
CCTATTC	15	0.008355161	50.065	43
ATGATTT	15	0.008378797	50.029266	33
CATGATT	15	0.0084024845	49.993584	32