SRR1526291_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526291_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	83493
Sequences flagged as poor quality	0
Sequence length	56
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCTTGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAACGATTAAG	297	0.3557184434623262	No Hit
GATCTTGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAG	257	0.30781023558861226	No Hit
GATCTTGGGTACCTGGTTGATCCTGCCAGTAGCATATGCCTGTCTCAAAGATTAAG	240	0.2874492472422838	No Hit
GATCTTGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTCGTCTCAAAGATTAAG	142	0.17007413795168458	No Hit
GATCTTGGGTACCTGGTTGATCCTGCCAGTAGCATATGCCCGTCTCAAAGATTAAG	128	0.1533062651958847	No Hit
GATCTTGGGGCCGAATAGCCTCTCCACCCAAGCGGCCGGCCAACCTGCGTGCAATC	128	0.1533062651958847	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AACGAAA	15	0.00807893	50.500607	38
AACCATA	20	3.9615243E-4	50.500603	38
TTCGTTT	20	3.9615243E-4	50.500603	38
ACCAACC	40	2.408342E-9	50.500603	38
CAAACCA	80	0.0	50.469944	39
AGATCCA	15	0.008098366	50.469944	39
GCGCCCT	15	0.008098366	50.469944	39
TCGTCTC	20	3.9734284E-4	50.469944	40
ACTAAAA	15	0.008098366	50.469944	39
CGTCTCA	40	2.4338078E-9	50.43932	41
AGCCATC	15	0.008137341	50.408733	37
TGCCCGT	20	3.9973218E-4	50.40873	37
TTTCGTT	20	3.9973218E-4	50.40873	37
AAACCAT	20	3.9973218E-4	50.40873	37
ATGCTCG	20	4.009311E-4	50.37818	36
TATGCCT	30	9.835258E-7	50.37818	35
GTTGTCG	15	0.008156881	50.37818	36
TGATAAC	15	0.008255104	50.225983	34
CCGATTC	20	4.0940396E-4	50.16536	43
ATAGAAT	15	0.008294638	50.16536	42