SRR1526288_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526288_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	116854
Sequences flagged as poor quality	0
Sequence length	56
%GC	41

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AATAAAGGGGCCGAATAGCCTCTCCACCCAAGCGGCCGGCCAACCTGCGTGCAATC	249	0.21308641552706797	No Hit
AATAAAGGGATGAGATGGACTTAAAGGAATTGACGGGTACCCACAGTTCTGAGTCG	234	0.2002498844712205	No Hit
AATAAAGGGATGAGATGGACTTAAATGAATTGACGGGTACCCACAGTTCTGAGTCG	220	0.18826912215242952	No Hit
AATAAAGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCCCTTGCCTAGCAAGCGC	216	0.18484604720420353	No Hit
AATAAAGGGATGAGATGGACTTAAAGGAATTGACGGGTACGCACAGTTCTGAGTCG	208	0.17799989730775156	No Hit
AATAAAGGGATGAGATGGACTTAAAGGAATTGACGGGTACGCCCAGTTCTGAGTCG	206	0.17628835983363858	No Hit
AATAAAGGGATGAGATGGACTTAAATGAATTGACGGGTACGCCCAGTTCTGAGTCG	194	0.1660191349889606	No Hit
AATAAAGGGATGAGATGGACTTAAATGAATTGACGGGTACGCACAGTTCTGAGTCG	168	0.14376914782549163	No Hit
AATAAAGGGATGAGATGGACTCAAAGGAATTGACGGGTACCCACAGTTCTGAGTCG	142	0.12151916066202269	No Hit
AATAAAGGGATTGACGGGTACGCACAGTTCTGAGTCGGAGCCACGCAGGGATGAGA	138	0.11809608571379669	No Hit
AATAAAGGGATGAGATGGACTCAAAGGAATTGACGGGTACGCCCAGTTCTGAGTCG	137	0.1172403169767402	No Hit
AATAAAGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGC	134	0.11467301076557071	No Hit
AATAAAGGGAATTGACGGGTACGCACAGTTCTGAGTCGGCCACACGCAGGGATGAG	132	0.11296147329145773	No Hit
AATAAAGGGATGAGATGGACTCAAAGGAATTGACGGGTACGCACAGTTCTGAGTCG	129	0.11039416708028822	No Hit
AATAAAGGGATGAGATGGACTCAAATGAATTGACGGGTACCCACAGTTCTGAGTCG	126	0.10782686086911873	No Hit
AATAAAGGGATTGACGGGTACGCACAGTTCTGAGTCGGACCCACGCAGGGATGAGA	121	0.10354801718383624	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACCAACC	75	0.0	50.500652	38
ACCGGTG	15	0.008087055	50.50065	39
TACACAC	35	4.8388756E-8	50.50065	38
CGGCGAA	30	9.764117E-7	50.456833	37
GTACGAC	15	0.008114868	50.456833	37
AGATCCC	15	0.008184711	50.34762	36
AAAAGTA	15	0.008212774	50.304066	35
TTAAGAC	15	0.008283243	50.19551	34
GCCTTGA	25	2.0387839E-5	50.15222	42
TCGCCTA	15	0.008311557	50.152218	42
GCCTTCA	15	0.008311557	50.152218	42
ACCAGCT	15	0.008311557	50.152218	42
AGTTATG	20	4.1236955E-4	50.10901	45
TTCTCAA	20	4.1236955E-4	50.10901	45
TCGCAAC	15	0.0083399415	50.109005	48
CTCCATC	15	0.0083399415	50.109005	49
CTGAATC	15	0.0083399415	50.109005	49
ACGGATG	25	2.0492173E-5	50.109005	48
GCATATT	15	0.0083399415	50.109005	49
CACGGAT	40	2.6066118E-9	50.08743	47