SRR1526286_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526286_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	18034
Sequences flagged as poor quality	0
Sequence length	56
%GC	52

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTGAAAGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCCCTTGCCTAGCAAGCGC	47	0.2606188310968171	No Hit
CTGAAAGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCAAAAAAAAAAAAAAA	30	0.1663524453809471	No Hit
CTGAAAGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGC	29	0.16080736386824887	No Hit
CTGAAAGGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAACCAAAAAAAAAAAAAAA	28	0.15526228235555065	No Hit
CTGAAAGGGGCTCTTTTCCTCTGGCGCGCCACCGACGATCCTATTGTCATCATGGG	28	0.15526228235555065	No Hit
CTGAAAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCCCCCGACTGCTCTTCC	26	0.14417211933015417	No Hit
CTGAAAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCC	25	0.13862703781745592	No Hit
CTGAAAGGGGCTTCTTTCCGGTTTCCGCGGCAGCCGCAGCCATGAGCAGCAAAGTC	19	0.10535654874126649	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AAGACCA	15	0.008091211	50.317417	36
TGTGAGG	15	0.008181803	50.17647	47
CACCGAC	15	0.008181803	50.17647	30
GACGGAT	15	0.008181803	50.17647	32
GGTTCGG	15	0.008181803	50.17647	31
TAAGACC	15	0.008181803	50.17647	35
TCCAGCC	15	0.008181803	50.17647	35
GTGAGGG	15	0.008181803	50.17647	48
GCTACCC	15	0.008181803	50.17647	33
CCACCGA	15	0.008181803	50.17647	29
TCTGTGA	15	0.008181803	50.17647	45
CAGGGTC	15	0.008181803	50.17647	30
CTGTGAG	15	0.008181803	50.17647	46
GACGATC	15	0.008181803	50.17647	34
TGAGGGT	15	0.008181803	50.17647	49
CGACGAT	15	0.008181803	50.17647	33
AGCGCCG	15	0.008181803	50.17647	45
GAGGGTG	15	0.008181803	50.17647	50
CGGTTCG	15	0.008181803	50.17647	30
TTCGGCG	15	0.008181803	50.17647	33