SRR1526285_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526285_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	48684
Sequences flagged as poor quality	0
Sequence length	56
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATACGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCCCCCGACTGCTCTTCC	79	0.16227097198258156	No Hit
GTATACGGGGCCGAATAGCCTCTCCACCCAAGCGGCCGGCCAACCTGCGTGCAATC	64	0.13146002793525594	No Hit
GTATACGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCCCTTGCCTAGCAAGCGC	60	0.12324377618930245	No Hit
GTATACGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCC	56	0.11502752444334893	No Hit
GTATACGGGGATCCCCTCGACCACTCCTTTGGCGCTTCGCTGTCGACCGTGCGCTT	49	0.10064908388793034	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATCCTAC	15	0.008034749	50.53814	37
TGCTTGT	20	3.9303207E-4	50.53814	37
TTCTCAC	15	0.008034749	50.53814	38
GCTTGTC	20	3.9303207E-4	50.53814	38
TTATTCA	15	0.008068037	50.48539	40
TATTCAG	15	0.008068037	50.48539	41
TGTCGAC	20	3.9506695E-4	50.485382	41
ATTGCCT	15	0.008202221	50.275467	35
ACCAAGC	15	0.0082360245	50.223263	48
TGATACA	25	2.0040226E-5	50.223263	34
GCCGGAC	15	0.0082360245	50.223263	34
GCTAACT	15	0.0082360245	50.223263	49
TACCAAG	15	0.0082360245	50.223263	47
CTACCAA	15	0.0082360245	50.223263	46
CCTACCA	15	0.008269932	50.17116	45
CCAATTC	15	0.008338057	50.06729	43
CTAACTT	15	0.008338057	50.06729	50
GATTAAG	15	0.008338057	50.06729	50
CATATGC	30	1.0174954E-6	50.06729	33
GACTCAA	15	0.008338057	50.06729	33