SRR1526282_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526282_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	58400
Sequences flagged as poor quality	0
Sequence length	56
%GC	52

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AGGGTCGGGGACACGCAGGGATGAGATGGCCAAAAAAAACCAAAAAAAAAAAAAAA	157	0.2688356164383562	No Hit
AGGGTCGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCC	130	0.2226027397260274	No Hit
AGGGTCGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCCCCCGACTGCTCTTCC	125	0.21404109589041095	No Hit
AGGGTCGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTC	103	0.17636986301369864	No Hit
AGGGTCGGGGACACGCAGGGATGAGATGGGCAAAAAAAACCAAAAAAAAAAAAAAA	98	0.1678082191780822	No Hit
AGGGTCGGGGACACGCAGGGATGAGATGGCCAAAAAAAAAAACCAAAACAAAAAAA	84	0.14383561643835616	No Hit
AGGGTCGGGGATCCCCTCGACCACTCCTTTGGCGCTTCGCTGTCGACCGTGCGCTT	82	0.14041095890410957	No Hit
AGGGTCGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCCCTTGCCTAGCAAGCGC	74	0.1267123287671233	No Hit
AGGGTCGGGGACACGCAGGGATGAGATGGGGAAAAAAAACCAAAAAAAAAAAAAAA	74	0.1267123287671233	No Hit
AGGGTCGGGGACACGCAGGGATGAGATGGCCAAAAAAAAACAAAAAAAAAAAAAAA	64	0.1095890410958904	No Hit
AGGGTCGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGC	61	0.10445205479452055	No Hit
AGGGTCGGGGATCCCCTCGACCACTCCTTTGGCGCTTCGCTGTCGACCCTGCGCTT	59	0.10102739726027397	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AACAACC	25	1.9608358E-5	50.429688	38
CCAGCGT	15	0.008111619	50.429688	39
CAACCAA	30	9.714258E-7	50.429688	40
TCTGGCC	15	0.008111619	50.429688	38
TTCCCGG	15	0.008111619	50.429688	41
ATTCCCG	15	0.008111619	50.429688	40
CATATTG	15	0.008111619	50.429688	40
AAACCAC	15	0.008195544	50.298702	37
TACAAAC	20	4.030507E-4	50.2987	37
AAGGCAT	15	0.0082518505	50.211754	35
CCGCTCT	30	1.0069507E-6	50.168392	48
AAAGGCA	15	0.008280112	50.168392	34
CTCGCGC	15	0.008280112	50.168392	49
ACCGATC	20	4.099968E-4	50.125107	50
TAGCAAG	15	0.008308445	50.125107	47
ACGGGCA	20	4.099968E-4	50.125107	44
TACGAAG	15	0.008308445	50.125107	47
CTACCAA	15	0.008308445	50.125107	46
CAAAGGC	20	4.117481E-4	50.081898	33
CCTAGCA	15	0.00833685	50.081898	45