SRR1526280_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526280_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	112626
Sequences flagged as poor quality	0
Sequence length	56
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAGATCGGGGACACGCAGGGATGAGATGGCCAAAAAAAACCAAAAAAAAAAAAAAA	346	0.30721147869941223	No Hit
GAGATCGGGGACACGCAGGGATGAGATGGGCAAAAAAAACCAAAAAAAAAAAAAAA	292	0.2592651785555733	No Hit
GAGATCGGGGACACGCAGGGATGAGATGGGGAAAAAAAACCAAAAAAAAAAAAAAA	230	0.20421572283486938	No Hit
GAGATCGGGGACACGCAGGGATGAGATGGGCAAAAAAAAAAACCAAAACAAAAAAA	165	0.1465025837728411	No Hit
GAGATCGGGGACACGCAGGGATGAGATGGCCAAAAAAAAAAACCAAAACAAAAAAA	159	0.14117521709019232	No Hit
GAGATCGGGGCCGAATAGCCTCTCCACCCAAGCGGCCGGCCAACCTGCGTGCAATC	158	0.1402873226430842	No Hit
GAGATCGGGGACACGCAGGGATGAGATGGGCAAAAAAAAACAAAAAAAAAAAAAAA	131	0.11631417257116473	No Hit
GAGATCGGGGACACGCAGGGATGAGATGGCCAAAAAAAAACAAAAAAAAAAAAAAA	130	0.1154262781240566	No Hit
GAGATCGGGGACACGCAGGGATGAGATGGGGAAAAAAAAAAACCAAAACAAAAAAA	113	0.10033207252321845	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GACCCTG	15	0.00796835	50.688545	41
CCACACG	15	0.00796835	50.688545	40
ACTAACA	15	0.007982628	50.66561	38
ACGGACC	20	3.90413E-4	50.665607	38
CGGCGAA	25	1.9500514E-5	50.52843	37
AGACCAT	15	0.008068695	50.52843	37
CACGGAC	20	3.9567592E-4	50.528427	37
CCGGCGA	30	9.817286E-7	50.414677	36
AAGGCTA	15	0.008140943	50.414677	36
ATACACA	15	0.008140943	50.414677	36
AAAGGCT	15	0.00815545	50.39199	35
TAAAGGC	15	0.008242897	50.256283	34
ATAAAAC	40	2.5484042E-9	50.21121	48
GTTGGCT	15	0.008272201	50.21121	49
ACAAGAG	15	0.008286881	50.188705	42
CCCTGCC	15	0.008301581	50.166218	43
CTTCACA	15	0.008301581	50.166218	44
CACCATA	30	1.0158001E-6	50.166218	44
TGGATTA	15	0.008360576	50.076477	50
CCAGGTG	15	0.008375373	50.054092	33