SRR1526278_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526278_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	49248
Sequences flagged as poor quality	0
Sequence length	56
%GC	49

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ATCAACGGGGCCGAATAGCCTCTCCACCCAAGCGGCCGGCCAACCTGCGTGCAATC	72	0.14619883040935672	No Hit
ATCAACGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCCCCCGACTGCTCTTCC	68	0.13807667316439245	No Hit
ATCAACGGGGGGCTGGAGAGATGGCTCAGCCGTTAAAGGCCAGGCTCACAACCAAA	67	0.1360461338531514	No Hit
ATCAACGGGGATCCCCTCGACCACTCCTTTGGCGCTTCGCTGTCGACCGTGCGCTT	58	0.1177712800519818	No Hit
ATCAACGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCC	54	0.10964912280701754	No Hit
ATCAACGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCCCTTGCCTAGCAAGCGC	52	0.1055880441845354	No Hit
ATCAACGGGGCTCTTTTCCTCTGGCGCGCCACCGACGATCCTATTGTCATCATGGG	50	0.10152696556205328	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCCTCCT	15	0.008026986	50.551544	39
ACAAACC	25	1.940285E-5	50.49948	38
ACCGGCC	15	0.008059796	50.49948	38
ACCTCCC	15	0.008059796	50.49948	38
AAACCAC	20	4.0064086E-4	50.34394	37
TTGCCTA	25	1.988172E-5	50.29231	42
CCTTGTC	20	4.0472476E-4	50.24078	43
AAGGCTA	25	2.0002954E-5	50.24078	36
TGCACCG	15	0.008225345	50.240776	36
TTTTCGT	15	0.008225345	50.240776	36
AAAGGCT	20	4.0677906E-4	50.189354	35
CCTGCGA	20	4.0884168E-4	50.13804	48
CTTCAAC	15	0.008292268	50.138035	49
TAGCAAG	25	2.024726E-5	50.138035	47
CTAGCAA	25	2.024726E-5	50.138035	46
TAGAGCC	15	0.008292268	50.138035	34
AGCAAGC	30	1.0078966E-6	50.138035	48
TCCTGCA	15	0.0084273275	49.933807	33
TGGTTGA	15	0.008461347	49.88301	14
GGTTGAT	15	0.008461347	49.88301	15