SRR1526277_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526277_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	23145
Sequences flagged as poor quality	0
Sequence length	56
%GC	56

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCCCTCGGGGCCGAATAGCCTCTCCACCCAAGCGGCCGGCCAACCTGCGTGCAATC	53	0.2289911427954202	No Hit
GCCCTCGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCCCTTGCCTAGCAAGCGC	45	0.19442644199611148	No Hit
GCCCTCGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGC	37	0.15986174119680277	No Hit
GCCCTCGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCC	30	0.12961762799740764	No Hit
GCCCTCGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCCCCCGACTGCTCTTCC	28	0.12097645279758047	No Hit
GCCCTCGGGGCTCTTTTCCTCTGGCGCGCCACCGACGATCCTATTGTCATCATGGG	27	0.1166558651976669	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTCCTGC	15	0.00795194	50.584614	37
AACCAAC	20	3.911252E-4	50.473682	41
CTTGCCT	15	0.008021477	50.473682	41
CGTCCTG	15	0.008091465	50.36324	36
TGCAATC	15	0.008232801	50.14379	50
ACCGCTG	15	0.008232801	50.14379	42
ACCAACA	20	4.0404464E-4	50.14379	42
TTGCCTA	15	0.008232801	50.14379	42
CAAGCGC	15	0.008232801	50.14379	50
CGCTGCA	15	0.0083041545	50.034782	44
CCAACAC	20	4.0842564E-4	50.034782	43
CCTGCGC	15	0.0083041545	50.034782	43
GTTCCTG	15	0.0083041545	50.034782	11
CCAAAAC	20	4.0842564E-4	50.034782	43
AAGAGTG	15	0.0083041545	50.034782	10
CAACACA	20	4.0842564E-4	50.034782	44
TTCCTGC	15	0.0083041545	50.034782	12
TGCCTAG	15	0.0083041545	50.034782	43
GTAAGAC	20	4.0842564E-4	50.034782	34
TCCTGCT	15	0.0083041545	50.034782	13