SRR1526274_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526274_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	53944
Sequences flagged as poor quality	0
Sequence length	56
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CCTTTCGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAG	954	1.7685006673587425	No Hit
CCTTTCGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAACGATTAAG	262	0.48568886252409904	No Hit
CCTTTCGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTCGTCTCAAAGATTAAG	246	0.456028473973009	No Hit
CCTTTCGGGTACCTGGTTGATCCTGCCAGTAGCATATGCCTGTCTCAAAGATTAAG	234	0.4337831825596915	No Hit
CCTTTCGGGCTCCTACTTGGATAACTGTGGTAATTCTAGAGCTAATACATGCCGAC	88	0.1631321370309951	No Hit
CCTTTCGGGGGGCCGATCGCACGCCCCCCGTGGCGGCGACGACCCATTCGAACGTC	62	0.11493400563547382	No Hit
CCTTTCGGGTACCTGGTTGATCCTGCCAGTAGCATATGCCGTCTTCTGCTTGGATC	60	0.11122645706658757	No Hit
CCTTTCGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAACGATTCAG	57	0.10566513421325818	No Hit
CCTTTCGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCCAAGATTAAG	54	0.10010381135992881	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCCTCCG	15	0.008122978	50.40657	39
CCCTCGC	15	0.008122978	50.40657	39
CCTTCCG	15	0.008153209	50.359287	41
CGTCTCA	25	1.975094E-5	50.359287	41
CCAAAAC	50	5.456968E-12	50.264984	43
TGCTCGT	25	1.9971667E-5	50.264984	37
CGGAGAG	15	0.008213923	50.26498	43
CACGACA	15	0.008213923	50.26498	44
ACGATTC	20	4.0786454E-4	50.171032	48
CGATTCA	20	4.0786454E-4	50.171032	49
ACGATTA	45	1.2732926E-10	50.17103	48
CGACAGA	15	0.008274972	50.171024	46
TGCATGC	15	0.008274972	50.171024	47
GCAGAAC	15	0.008274972	50.171024	48
CAGAACC	15	0.008274972	50.171024	49
CGCAACC	15	0.008274972	50.171024	49
TATGCTC	25	2.0306587E-5	50.124184	35
ACGACAG	15	0.008305623	50.12418	45
CAGGACG	15	0.008305623	50.12418	36
TGGAAGG	15	0.008367178	50.030754	15