SRR1526272_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526272_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	21870
Sequences flagged as poor quality	0
Sequence length	56
%GC	51

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTCGCAGGGATGAGATGGACTTAAATGAATTGACGGGTACGCACAGTTCTGAGTCG	183	0.8367626886145405	No Hit
CTCGCAGGGATGAGATGGACTTAAAGGAATTGACGGGTACGCACAGTTCTGAGTCG	171	0.7818930041152263	No Hit
CTCGCAGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAG	90	0.411522633744856	No Hit
CTCGCAGGGATGAGATGGACTTAAATGAATTGACGGGTACCCACAGTTCTGAGTCG	86	0.39323273891175126	No Hit
CTCGCAGGGATGAGATGGACTTAAAGGAATTGACGGGTACCCACAGTTCTGAGTCG	77	0.3520804755372657	No Hit
CTCGCAGGGATGAGATGGACTCAAAGGAATTGACGGGTACGCACAGTTCTGAGTCG	64	0.2926383173296754	No Hit
CTCGCAGGGATGAGATGGACTCAAATGAATTGACGGGTACGCACAGTTCTGAGTCG	63	0.2880658436213992	No Hit
CTCGCAGGGATGAGATGGACTCAAAGGAATTGACGGGTACCCACAGTTCTGAGTCG	50	0.2286236854138089	No Hit
CTCGCAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCC	43	0.19661636945587563	No Hit
CTCGCAGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAACGATTAAG	40	0.18289894833104708	No Hit
CTCGCAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCCCCCGACTGCTCTTCC	39	0.17832647462277093	No Hit
CTCGCAGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTCGTCTCAAAGATTAAG	36	0.1646090534979424	No Hit
CTCGCAGGGGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	33	0.15089163237311387	No Hit
CTCGCAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTC	33	0.15089163237311387	No Hit
CTCGCAGGGATGAGATGGACTCAAATGAATTGACGGGTACCCACAGTTCTGAGTCG	23	0.10516689529035209	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCCTTTT	25	1.8196035E-5	50.88498	39
CCCACAG	40	2.1191227E-9	50.88498	40
ACCCACA	40	2.1191227E-9	50.88498	39
TACCCAC	40	2.1191227E-9	50.88498	38
ACGCCCA	35	4.32683E-8	50.884975	39
TACGCCC	35	4.32683E-8	50.884975	38
TCCAAGT	15	0.007761206	50.884975	38
CCAAGTG	15	0.007761206	50.884975	39
CCGACGG	15	0.007761206	50.884975	39
CAAGTGG	15	0.007761206	50.884975	40
TGCCGAC	15	0.007833732	50.76581	37
GTACCCA	30	9.0039794E-7	50.76581	37
GACGGGC	15	0.007833732	50.76581	41
CTCCAAG	15	0.007833732	50.76581	37
GTACGCC	35	4.4083208E-8	50.76581	37
TTTTCCT	25	1.8972021E-5	50.529137	36
ACTCCAA	15	0.007980296	50.529137	36
GGTACCC	35	4.5749402E-8	50.529137	36
AAGAGCC	20	3.9299903E-4	50.411625	35
CGCTGAC	15	0.008128891	50.294662	47