SRR1526270_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526270_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	29276
Sequences flagged as poor quality	0
Sequence length	56
%GC	38

Per base quality graph

Per base quality graph

Per Sequence quality graph

$Per base sequence content$

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TCTACCGGGAAGCAGTGGTATCAACGCAGAGTCGACTTTTTTTTTTTTTTTTTTTT	71	0.24251946987293346	No Hit
TCTACCGGGGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	53	0.18103566060937287	No Hit
TCTACCGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAG	53	0.18103566060937287	No Hit
TCTACCGGGGCCGAATAGCCTCTCCACCCAAGCGGCCGGAGAACCTGCGTGCAATC	46	0.15712529034021042	No Hit
TCTACCGGGAAGCATGGTATCAACGCAAAAAAAAAAAAAACAAAAAAAAAAAAAAA	39	0.13321492007104796	No Hit
TCTACCGGGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	36	0.12296761852712118	No Hit
TCTACCGGGGCCGAATAGCCTCTCCACCCAAGCGGCCGGACAACCTGCGTGCAATC	33	0.11272031698319443	No Hit
TCTACCGGGAAGCATGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	31	0.10588878262057658	No Hit
TCTACCGGGAAGCAACGCAGAGTCGACTTTTCTTTTTTTTCTTTTTTCTTTTTTTT	30	0.10247301543926765	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGGACAA	15	0.008102634	50.379967	37
ATATGCT	15	0.008102634	50.379967	34
ACAACCT	15	0.008102634	50.379967	40
CATATGC	20	4.102713E-4	50.034306	33
CAGCTAG	15	0.008326731	50.0343	33
TAGTGAG	15	0.008326731	50.0343	47
CCTGCCT	15	0.008326731	50.0343	44
CCAAAAC	15	0.008326731	50.0343	43
GTGAGTC	15	0.008326731	50.0343	49
TGCCTGC	15	0.008326731	50.0343	46
GTGGGTT	15	0.008326731	50.0343	42
ATAGTGA	15	0.008326731	50.0343	46
AGTGAGT	15	0.008326731	50.0343	48
CAGATTT	15	0.008326731	50.0343	49
TGGGTTT	15	0.008326731	50.0343	43
GCCTGCA	15	0.008326731	50.0343	47
TGAGTCC	15	0.008326731	50.0343	50
ATCCTGC	30	1.0200947E-6	49.94863	20
TCCTTCG	15	0.008383468	49.94863	16
TCTAGGC	15	0.008383468	49.94863	26