SRR1526268_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526268_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	65967
Sequences flagged as poor quality	0
Sequence length	56
%GC	51

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CCTAGAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCC	198	0.3001500750375188	No Hit
CCTAGAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCCCCCGACTGCTCTTCC	158	0.23951369624206043	No Hit
CCTAGAGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCGCGCA	157	0.23799778677217395	No Hit
CCTAGAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGTTCTTCC	120	0.18190913638637501	No Hit
CCTAGAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTC	117	0.17736140797671565	No Hit
CCTAGAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCCCCCGACTGTTCTTCC	86	0.1303682144102354	No Hit
CCTAGAGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGC	79	0.11975684812103021	No Hit
CCTAGAGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACCCTCCTCGTTCGCGCA	67	0.10156593448239272	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AACCAAA	15	0.008066793	50.5077	41
CGAAGCC	15	0.008066793	50.5077	41
TTACTTT	15	0.008140824	50.391235	37
CGCTCTT	25	1.9996627E-5	50.275307	49
ACCGCTC	20	4.074385E-4	50.198315	47
TTACATT	15	0.00826533	50.198315	46
CTAGCAA	20	4.074385E-4	50.198315	46
CCTCCTG	15	0.008290401	50.15991	50
CTTCCTA	15	0.008315528	50.121555	42
TGATTGC	15	0.008340712	50.08327	44
TGCCTAG	15	0.008340712	50.08327	43
CTGATTG	15	0.008340712	50.08327	43
GTTGGGA	15	0.008416602	49.968746	32
GATTTAG	20	4.1834376E-4	49.930695	19
CAATTGT	20	4.1834376E-4	49.930695	27
TGTTGTT	20	4.1834376E-4	49.930695	18
GAGGCCA	20	4.1834376E-4	49.930695	17
TCCGGAA	15	0.0084420135	49.93069	17
GTAGGAT	15	0.0084420135	49.93069	33
GCCGATG	15	0.0084420135	49.93069	28