SRR1526265_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526265_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	76749
Sequences flagged as poor quality	0
Sequence length	56
%GC	50

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CACAAGGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAG	1645	2.1433504019596348	No Hit
CACAAGGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTCGTCTCAAAGATTAAG	433	0.5641767319443902	No Hit
CACAAGGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAACGATTAAG	408	0.5316030176288942	No Hit
CACAAGGGGTACCTGGTTGATCCTGCCAGTAGCATATGCCTGTCTCAAAGATTAAG	404	0.5263912233384149	No Hit
CACAAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCC	171	0.22280420591799244	No Hit
CACAAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCCCCCGACTGCTCTTCC	149	0.19413933732035596	No Hit
CACAAGGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAACGATTCAG	126	0.1641715201500997	No Hit
CACAAGGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCGCGCA	119	0.1550508801417608	No Hit
CACAAGGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGC	119	0.1550508801417608	No Hit
CACAAGGGGCTCCTACTTGGATAACTGTGGTAATTCTAGAGCTAATACATGCCGAC	89	0.11596242296316565	No Hit
CACAAGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTC	86	0.11205357724530614	No Hit
CACAAGGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCCAAGATTAAG	77	0.10032704009172759	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATGCCCG	15	0.008172053	50.3505	36
AAGCCGC	15	0.008193415	50.317287	35
TAGAGCG	15	0.008214818	50.284115	34
GCAAGCG	15	0.008214818	50.284115	49
CGATTCA	40	2.4974725E-9	50.284115	49
ATATGCC	70	0.0	50.284115	34
ATTCCTT	15	0.008214818	50.284115	47
ACGATTC	40	2.4974725E-9	50.284115	48
ATTGACC	15	0.008214818	50.284115	34
CTGTGAT	15	0.008214818	50.284115	34
CCCTGAT	15	0.008236264	50.250988	45
TCCAAGA	15	0.008236264	50.250988	45
GATTCAG	45	1.2914825E-10	50.151875	50
ACGGGTA	15	0.008344114	50.086018	33
TATTGAC	15	0.008344114	50.086018	33
CTATTGA	15	0.008409326	49.987553	32
TCGAGCG	15	0.008409326	49.987553	32
GGCTATA	15	0.008431148	49.954815	28
AATTGAC	20	4.1778013E-4	49.95481	28
GAATAGC	30	1.0461481E-6	49.922123	13