SRR1526264_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526264_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	26782
Sequences flagged as poor quality	0
Sequence length	56
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AGGACTGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAG	472	1.762377716376671	No Hit
AGGACTGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAACGATTAAG	150	0.5600776641027556	No Hit
AGGACTGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTCGTCTCAAAGATTAAG	118	0.44059442909416774	No Hit
AGGACTGGGTACCTGGTTGATCCTGCCAGTAGCATATGCCTGTCTCAAAGATTAAG	97	0.3621835561197819	No Hit
AGGACTGGGGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	49	0.18295870360690017	No Hit
AGGACTGGGAGATATCAACGCAGAGTCGACTCTTTTTTTTTTTTTTTTTTTTTTTT	32	0.11948323500858785	No Hit
AGGACTGGGAAGCAGTGGTATCAACGCAGAGTCGACTTTTTTTTTTTTTTTTTTTT	31	0.11574938391456949	No Hit
AGGACTGGGGTTCAACGCAGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	30	0.11201553282055113	No Hit
AGGACTGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCCAAGATTAAG	28	0.10454783063251437	No Hit
AGGACTGGGAGGTCTACGCCTGCGTCCGGCTAGCGCACAACCTGGATCCGCCAATC	28	0.10454783063251437	No Hit
AGGACTGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAACGATTCAG	27	0.10081397953849601	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AACGATT	35	4.8899892E-8	50.182335	47
ACGATTA	35	4.8899892E-8	50.182335	48
CAACGAT	35	4.8899892E-8	50.182335	46
TCAAAGA	55	0.0	50.18233	45
AAGATTA	55	0.0	50.18233	48
GATCCGC	15	0.008222177	50.18233	45
GCTTGCC	15	0.008222177	50.18233	38
CAAAGAT	55	0.0	50.18233	46
CTTGCCT	15	0.008222177	50.18233	39
TCCGCCA	15	0.008222177	50.18233	47
ATCCGCC	15	0.008222177	50.18233	46
AAAGATT	55	0.0	50.18233	47
CTCAAAG	55	0.0	50.18233	44
TTGCCTC	15	0.008222177	50.18233	40
AGGAGGC	15	0.008222177	50.18233	47
GGCCGGT	15	0.008283605	50.08818	9
GGTCTCA	15	0.008283605	50.08818	9
GGTTTCT	15	0.008283605	50.08818	9
TTCCCCG	15	0.008283605	50.08818	11
TACGCCT	15	0.008283605	50.08818	15