SRR1526262_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526262_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	49574
Sequences flagged as poor quality	0
Sequence length	56
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGAGTAGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAG	270	0.5446403356598217	No Hit
CGAGTAGGGATGAGATGGACTTAAAGGAATTGACGGGTACGCACAGTTCTGAGTCG	238	0.48009036995199095	No Hit
CGAGTAGGGATGAGATGGACTTAAATGAATTGACGGGTACGCACAGTTCTGAGTCG	202	0.4074716585306814	No Hit
CGAGTAGGGATGAGATGGACTCAAAGGAATTGACGGGTACGCACAGTTCTGAGTCG	173	0.3489732521079598	No Hit
CGAGTAGGGATGAGATGGACTCAAATGAATTGACGGGTACGCACAGTTCTGAGTCG	118	0.23802799854762577	No Hit
CGAGTAGGGATGAGATGGACTTAAAGGAATTGACGGGTACCCACAGTTCTGAGTCG	98	0.1976842699802316	No Hit
CGAGTAGGGATGAGATGGACTTAAATGAATTGACGGGTACCCACAGTTCTGAGTCG	90	0.1815467785532739	No Hit
CGAGTAGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAACGATTAAG	88	0.17751240569653445	No Hit
CGAGTAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCC	87	0.17549521926816478	No Hit
CGAGTAGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTCGTCTCAAAGATTAAG	78	0.15734054141283738	No Hit
CGAGTAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTC	72	0.14523742284261912	No Hit
CGAGTAGGGATGAGATGGACTCAAATGAATTGACGGGTACCCACAGTTCTGAGTCG	68	0.13716867712914027	No Hit
CGAGTAGGGATGAGATGGACTCAAAGGAATTGACGGGTACCCACAGTTCTGAGTCG	67	0.13515149070077057	No Hit
CGAGTAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCCCCCGACTGCTCTTCC	66	0.13313430427240086	No Hit
CGAGTAGGGTACCTGGTTGATCCTGCCAGTAGCATATGCCTGTCTCAAAGATTAAG	56	0.11296243998870376	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TTTTACT	20	3.975758E-4	50.422882	39
ACTTCCT	15	0.008108702	50.422882	40
TACGCCC	40	2.406523E-9	50.422882	38
TTTACTT	20	3.975758E-4	50.422882	40
GCTTGTC	25	1.958028E-5	50.42288	38
GCCCAGT	35	4.859612E-8	50.37143	41
TGTCTCA	25	1.9699191E-5	50.37143	41
CCACAGT	45	1.2187229E-10	50.37143	41
TTACTTT	20	3.9958768E-4	50.371426	41
ATATGCT	35	4.9385562E-8	50.268837	34
CAGCAAA	15	0.008240644	50.2177	47
TTCGCGC	15	0.008240644	50.2177	49
CTTTGAG	15	0.008240644	50.2177	49
CTTCCGA	15	0.008240644	50.2177	46
GATAGAA	15	0.008307211	50.115738	43
CTTACTG	15	0.008340645	50.064907	50
CTCTCTA	15	0.008374178	50.014187	32
CATATGC	40	2.586603E-9	50.014183	33
TGTCCCG	15	0.008407812	49.963562	15
CCAGGAC	15	0.008407812	49.963562	16