SRR1526261_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526261_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	48862
Sequences flagged as poor quality	0
Sequence length	56
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TGCAATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAG	207	0.42364209406082437	No Hit
TGCAATGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCC	148	0.3028938643526667	No Hit
TGCAATGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCCCCCGACTGCTCTTCC	118	0.24149645941631534	No Hit
TGCAATGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGC	87	0.17805247431541893	No Hit
TGCAATGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTC	78	0.15963325283451352	No Hit
TGCAATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAACGATTAAG	67	0.13712087102451803	No Hit
TGCAATGGGGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	66	0.13507429085997297	No Hit
TGCAATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTCGTCTCAAAGATTAAG	49	0.10028242806270722	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AGCCCAC	15	0.007998959	50.595413	38
GCTTGTC	15	0.007998959	50.595413	38
CGCTGTA	15	0.008165337	50.33299	43
TGCCTAG	25	1.9783483E-5	50.332985	43
CTTTGCC	20	4.0102997E-4	50.332985	44
ACTGATT	15	0.00819892	50.28083	42
TTGCCTA	20	4.0309102E-4	50.280827	42
AGATTAA	30	9.951491E-7	50.22878	49
TATGCTT	20	4.051605E-4	50.228775	35
AGAGCGC	20	4.051605E-4	50.228775	35
CCTAGCA	25	2.0151416E-5	50.176838	45
CCCGCTG	15	0.008300282	50.125	50
ATATGCT	30	1.0167241E-6	50.073273	34
ATATGCC	15	0.008334276	50.073273	34
CGAAAGG	15	0.008334276	50.073273	15
GGTTGAT	45	1.2914825E-10	50.07327	15
CTTAATC	20	4.114196E-4	50.07327	15
TCTTAAT	20	4.114196E-4	50.07327	14
GGTAAGC	20	4.114196E-4	50.07327	34
TAAGCAA	15	0.008368374	50.021652	32