SRR1526259_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526259_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	88380
Sequences flagged as poor quality	0
Sequence length	56
%GC	41

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TATTGTGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAG	3021	3.4181941615750167	No Hit
TATTGTGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAACGATTAAG	773	0.8746322697442861	No Hit
TATTGTGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTCGTCTCAAAGATTAAG	701	0.7931658746322697	No Hit
TATTGTGGGTACCTGGTTGATCCTGCCAGTAGCATATGCCTGTCTCAAAGATTAAG	656	0.7422493776872595	No Hit
TATTGTGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAACGATTCAG	210	0.23761031907671418	No Hit
TATTGTGGGTACCTGGTTGATCCTGCCAGTAGCATATGCCCGTCTCAAAGATTAAG	165	0.18669382213170402	No Hit
TATTGTGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCCAAGATTAAG	152	0.1719846119031455	No Hit
TATTGTGGGTACCTGGTTGATCCTGCCAGTAGCATATGCCGTCTTCTGCTTGGATC	149	0.16859017877347815	No Hit
TATTGTGGGGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	117	0.13238289205702647	No Hit
TATTGTGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTAGTCTCAAAGATTAAG	98	0.11088481556913328	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCCTGTC	100	0.0	50.373787	38
TCTCTCA	15	0.0081797885	50.344967	40
TTGCCTC	20	4.0237035E-4	50.344967	40
AAACAAC	20	4.0350866E-4	50.316185	41
AAAGGCG	15	0.008235464	50.25871	36
TATGCTA	15	0.008254085	50.230022	35
TATGCCT	110	0.0	50.23002	35
CACGATT	35	5.0977178E-8	50.14416	47
CGATTCA	80	0.0	50.14416	49
ATATGCC	235	0.0	50.14416	34
ACGATTC	80	0.0	50.14416	48
TTAAGAC	15	0.0083101345	50.14416	34
TCCACGA	30	1.0163658E-6	50.14416	45
CCACGAT	30	1.0163658E-6	50.14416	46
CGATTAA	150	0.0	50.144157	49
ACGATTA	150	0.0	50.144157	48
ACAACAA	20	4.1154883E-4	50.11561	43
GATGCGT	15	0.008328881	50.115604	44
CGTTAAG	15	0.00840418	50.001705	32
GAAGTTT	15	0.00840418	50.001705	14