SRR1526258_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526258_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	27346
Sequences flagged as poor quality	0
Sequence length	56
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCAGGAGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAG	112	0.40956629854457693	No Hit
GCAGGAGGGATGAGATGGACTTAAAGGAATTGACGGGTACGCACAGTTCTGAGTCG	55	0.2011263073209976	No Hit
GCAGGAGGGGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	44	0.16090104585679807	No Hit
GCAGGAGGGTACCTGGTTGATCCTGCCAGTAGCATATGCCTGTCTCAAAGATTAAG	37	0.135303152197762	No Hit
GCAGGAGGGGAGACCGCACTCGGACCTGCTCCGCTCCTGCCCCGCGGCCAAGGAGA	36	0.13164631024647117	No Hit
GCAGGAGGGATGAGATGGACTTAAATGAATTGACGGGTACGCACAGTTCTGAGTCG	36	0.13164631024647117	No Hit
GCAGGAGGGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	35	0.1279894682951803	No Hit
GCAGGAGGGAATGTTAATTTAACTAACTTGTCTTTTTTAGCCTGTGCTTAATTTAA	34	0.1243326263438894	No Hit
GCAGGAGGGATGAGATGGACTCAAAGGAATTGACGGGTACGCACAGTTCTGAGTCG	33	0.12067578439259855	No Hit
GCAGGAGGGGAGACCGCACTCGGACCTGCTCCGCTCCTGCACCGCGGCCAAGGAGA	33	0.12067578439259855	No Hit
GCAGGAGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAACGATTAAG	32	0.11701894244130769	No Hit
GCAGGAGGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAA	29	0.1060484165874351	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACCCACA	20	3.8591743E-4	50.64366	39
ACGCCCA	15	0.007930726	50.643658	39
CGCCCAG	15	0.007930726	50.643658	40
TACGCCC	15	0.007930726	50.643658	38
TACCCAC	15	0.007930726	50.643658	38
ACACCGC	15	0.007989538	50.549347	37
AGCCCTG	15	0.007989538	50.549347	37
CCTGCAC	15	0.008048674	50.45539	36
GCGGCCA	15	0.008228038	50.175602	44
TCTCAAC	20	4.0407866E-4	50.175602	43
CCCAGTT	15	0.008288482	50.083027	42
CAGCAAA	20	4.0779103E-4	50.083027	46
AACGATT	20	4.0779103E-4	50.083027	47
GTTCTGA	35	4.971662E-8	50.083027	46
GCAGCAA	15	0.008288482	50.083027	45
GGCCAAG	20	4.0779103E-4	50.083027	46
ACGATTA	20	4.0779103E-4	50.083027	48
CGGCCAA	20	4.0779103E-4	50.083027	45
CAAGGAG	15	0.008288482	50.083027	49
AATGTTT	15	0.008288482	50.083027	49