SRR1526254_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526254_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	58915
Sequences flagged as poor quality	0
Sequence length	56
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TAAGGGGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAG	244	0.4141559874395315	No Hit
TAAGGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCC	91	0.15445981498769412	No Hit
TAAGGGGGGGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	76	0.1289994059237885	No Hit
TAAGGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCCCCCGACTGCTCTTCC	72	0.12220996350674701	No Hit
TAAGGGGGGTACCTGGTTGATCCTGCCAGTAGCATATGCCTGTCTCAAAGATTAAG	69	0.11711788169396589	No Hit
TAAGGGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTC	64	0.108631078672664	No Hit
TAAGGGGGGGACAGGAGCCACTGCCAGGATCAAGAGTCACCGCTTCGCAAGCACTG	62	0.10523635746414325	No Hit
TAAGGGGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAACGATTAAG	59	0.10014427565136212	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGCCAAA	15	0.008255913	50.206158	36
GCAAGAA	15	0.0083119515	50.12041	46
CAACTCT	15	0.0083119515	50.12041	48
ACCCGCT	15	0.0083119515	50.12041	34
GAATGGC	15	0.0083119515	50.12041	44
AACTCTA	15	0.0083119515	50.12041	49
CACCTGC	15	0.0083119515	50.12041	43
CTTGTGC	15	0.0083119515	50.12041	49
CAGGCAC	15	0.0083119515	50.12041	49
GCATATT	15	0.0083119515	50.12041	49
AAGCATA	15	0.0083119515	50.12041	47
CCAAAAC	40	2.5538611E-9	50.120407	43
AATTCGT	20	4.1195587E-4	50.077644	13
GAAGTTA	15	0.0083400775	50.077644	9
TGTTCAC	15	0.0083400775	50.077644	11
GATGAGC	15	0.0083400775	50.077644	13
GAATTCG	20	4.1195587E-4	50.077644	12
AGATGGA	25	2.0442378E-5	50.077644	13
GGAATTC	30	1.0198164E-6	50.077644	11
TGTACGC	15	0.0083400775	50.077644	10