SRR1526248_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526248_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	29136
Sequences flagged as poor quality	0
Sequence length	56
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GACACTGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAG	58	0.19906644700713894	No Hit
GACACTGGGGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	57	0.19563426688632618	No Hit
GACACTGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGC	56	0.19220208676551345	No Hit
GACACTGGGGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	50	0.17160900604063703	No Hit
GACACTGGGTGGTCACGCAGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	30	0.10296540362438221	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACGCCCA	15	0.008001301	50.53927	39
TTTTAAT	15	0.008001301	50.53927	39
CAGCATT	15	0.008056784	50.45122	43
ACAATAC	15	0.008056784	50.45122	43
TAATTTT	15	0.0081125535	50.36348	42
TGCCGCT	15	0.008224952	50.18891	45
CCGCTCC	15	0.008224952	50.18891	47
CGCTCCT	15	0.008224952	50.18891	48
CCTCAGA	15	0.008224952	50.18891	15
TTGATAT	15	0.008224952	50.18891	49
GCCGCTC	15	0.008224952	50.18891	46
TTAACCA	15	0.008224952	50.18891	45
TTCGTGG	25	1.9918882E-5	50.188908	15
ATTCGTG	25	1.9918882E-5	50.188908	14
GGGTTGG	15	0.008281583	50.102077	11
AAGAGTG	35	4.9722075E-8	50.102077	10
AGATGTG	15	0.008281583	50.102077	13
AGCATGT	20	4.0748165E-4	50.102077	11
GAGATGT	15	0.008281583	50.102077	12
AATTCGT	25	2.0124848E-5	50.102074	13