SRR1526242_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526242_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	97234
Sequences flagged as poor quality	0
Sequence length	56
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAAGTTGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAG	598	0.6150112100705515	No Hit
AAAGTTGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCC	331	0.3404159039019273	No Hit
AAAGTTGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTC	235	0.24168500730197257	No Hit
AAAGTTGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCCCCCGACTGCTCTTCC	219	0.2252298578686468	No Hit
AAAGTTGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAACGATTAAG	170	0.17483596272908655	No Hit
AAAGTTGGGACTGCCCAGCTCCAAACAGACTTATTTTAGTGATTTATTCTTCTCTA	162	0.16660838801242364	No Hit
AAAGTTGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTCGTCTCAAAGATTAAG	147	0.1511816854186807	No Hit
AAAGTTGGGGAGGCATTCAGGCAGCGAGAGCAGAGCAGCGTAGAGCAGCACAGCTG	115	0.11827138655202912	No Hit
AAAGTTGGGTACCTGGTTGATCCTGCCAGTAGCATATGCCTGTCTCAAAGATTAAG	113	0.11621449287286341	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CCGTTGT	15	0.008229408	50.271923	38
CGTTGTA	15	0.008246313	50.24585	39
ACGATTA	25	2.0200501E-5	50.219803	48
GCTCTAA	15	0.008263244	50.219803	48
CCTTGGT	15	0.008263244	50.219803	49
CAACGAT	35	5.0860763E-8	50.16779	46
ACCTCCT	15	0.008297184	50.167786	45
TCGACCC	15	0.008297184	50.167786	43
ACCCGTT	20	4.1069466E-4	50.14182	36
TTCTCTA	25	2.0512587E-5	50.08997	50
TGCTTCA	15	0.008399623	50.01239	14
AAGTGAG	15	0.008399623	50.01239	32
ATATGCC	15	0.008416788	49.986584	34
CGGTAGG	20	4.170324E-4	49.986584	31
GTAGGAT	15	0.008433979	49.960804	33
TGCGGAG	15	0.008451195	49.93505	30
TATTCAC	15	0.008451195	49.93505	29
TCCGTCA	15	0.008451195	49.93505	28
CGCCGGT	15	0.008451195	49.93505	28
ACTGGAT	15	0.008451195	49.93505	11