SRR1526240_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526240_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	68816
Sequences flagged as poor quality	0
Sequence length	56
%GC	52

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTCGGTGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAG	3009	4.372529644268774	No Hit
GTCGGTGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAACGATTAAG	818	1.1886770518484073	No Hit
GTCGGTGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTCGTCTCAAAGATTAAG	778	1.1305510346431062	No Hit
GTCGGTGGGTACCTGGTTGATCCTGCCAGTAGCATATGCCTGTCTCAAAGATTAAG	669	0.9721576377586607	No Hit
GTCGGTGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAACGATTCAG	215	0.31242734247849335	No Hit
GTCGGTGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCCAAGATTAAG	177	0.2572076261334573	No Hit
GTCGGTGGGTACCTGGTTGATCCTGCCAGTAGCATATGCCCGTCTCAAAGATTAAG	155	0.22523831667054175	No Hit
GTCGGTGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCGCGCA	142	0.20634736107881888	No Hit
GTCGGTGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTAGTCTCAAAGATTAAG	106	0.1540339455940479	No Hit
GTCGGTGGGTACCTGGTTGATCCTGCCAGTAGCATATGCCGTCTTCTGCTTGGATC	105	0.15258079516391537	No Hit
GTCGGTGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTC	100	0.14531504301325274	No Hit
GTCGGTGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGC	97	0.14095559172285513	No Hit
GTCGGTGGGCTCCTACTTGGATAACTGTGGTAATTCTAGAGCTAATACATGCCGAC	93	0.13514299000232505	No Hit
GTCGGTGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCC	90	0.13078353871192747	No Hit
GTCGGTGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCCCCCGACTGCTCTTCC	78	0.11334573355033713	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCTAGTC	15	0.00801402	50.593933	38
TTGCCTG	15	0.00801402	50.593933	38
CGTCTCA	115	0.0	50.519203	41
ACGCGAC	15	0.008084617	50.48192	37
TGCTAGT	15	0.008084617	50.48192	37
AAGTCTT	15	0.008084617	50.48192	37
CAGCATT	15	0.008155677	50.370396	43
CCTCCAC	15	0.008155677	50.370396	43
ATGCTCG	110	0.0	50.333336	36
CGATTCA	45	1.2369128E-10	50.333336	49
CGATTAA	125	0.0	50.333336	49
TATGCCT	110	0.0	50.333336	35
CACGCGA	15	0.008179465	50.333332	36
AGATTCA	15	0.008179465	50.333332	49
ACGATTA	130	0.0	50.296326	48
AAGATTC	15	0.008203306	50.29632	48
AACGATT	165	0.0	50.259365	47
TGATATG	15	0.008251144	50.22247	50
CAACGAT	155	0.0	50.22247	46
TACGAGG	15	0.008251144	50.22247	50