SRR1526238_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526238_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	44123
Sequences flagged as poor quality	0
Sequence length	56
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGCGAGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAG	593	1.343970264941187	No Hit
GGGCGAGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAACGATTAAG	159	0.3603562767717517	No Hit
GGGCGAGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTCGTCTCAAAGATTAAG	155	0.35129071006051266	No Hit
GGGCGAGGGTACCTGGTTGATCCTGCCAGTAGCATATGCCTGTCTCAAAGATTAAG	123	0.27876617637060036	No Hit
GGGCGAGGGGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	111	0.25156947623688325	No Hit
GGGCGAGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGC	45	0.10198762550143917	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGTCTCA	25	1.9526668E-5	50.430542	41
TGCTTGT	110	0.0	50.43054	37
TGCTTGC	15	0.008097856	50.43054	37
ATATGCT	155	0.0	50.315006	34
CTGAGTC	40	2.5429472E-9	50.085518	49
AACGATT	45	1.2732926E-10	50.085518	47
ACGATTC	20	4.1049195E-4	50.085518	48
ACGATTA	25	2.0338284E-5	50.085518	48
CGGCCAA	20	4.1049195E-4	50.085518	45
GCCAAGG	20	4.1049195E-4	50.085518	47
CGATTAA	25	2.0338284E-5	50.085518	49
CACGCCG	15	0.008358602	50.028477	43
TCGCGAC	15	0.008358602	50.028477	13
TTGATAC	15	0.008358602	50.028477	33
CAACGAT	45	1.2914825E-10	50.028477	46
GTTCTGA	50	7.2759576E-12	50.028473	46
CTGGTTG	190	0.0	50.028473	13
GCTCCTG	20	4.1281173E-4	50.028473	33
GGCTCTC	20	4.151419E-4	49.97156	9
CGCACTC	20	4.151419E-4	49.97156	15