SRR1526235_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526235_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	93902
Sequences flagged as poor quality	0
Sequence length	56
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACTTATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAG	1670	1.7784498732721348	No Hit
ACTTATGGGAATTGACGGGTACGCACAGTTCTGAGTCGGAGACACGCAGGGATGAG	423	0.45046963855934913	No Hit
ACTTATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAACGATTAAG	403	0.42917083768183856	No Hit
ACTTATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCCTGTCTCAAAGATTAAG	382	0.40680709676045235	No Hit
ACTTATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTCGTCTCAAAGATTAAG	381	0.4057421567165769	No Hit
ACTTATGGGAATTGACGGGTACGCACAGTTCTGAGTCGGACACACGCAGGGATGAG	171	0.1821047475027156	No Hit
ACTTATGGGAATTGACGGGTACGCACAGTTCTGAGTCGGCCACACGCAGGGATGAG	150	0.15974100658132948	No Hit
ACTTATGGGAATTGACGGGTACGCACAGTTCTGAGTCGGCGACACGCAGGGATGAG	145	0.1544163063619518	No Hit
ACTTATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAACGATTCAG	123	0.13098762539669018	No Hit
ACTTATGGGGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	113	0.12033822495793488	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TACGCCC	15	0.008165706	50.369408	38
GCGACAC	45	1.2551027E-10	50.315224	39
CGTCTCA	55	0.0	50.315224	41
CCACACG	45	1.2551027E-10	50.315224	40
ACGCCCA	15	0.0082005495	50.31522	39
CTAGTCT	15	0.0082005495	50.31522	39
TCGTCTC	40	2.4938345E-9	50.31522	40
AGTCTCA	20	4.0367898E-4	50.31522	41
TGATACA	20	4.058286E-4	50.26115	34
CAAGAGA	15	0.008235503	50.261147	36
ATACAAA	15	0.008235503	50.261147	36
CAACGAT	85	0.0	50.18026	46
CGATTAA	75	0.0	50.18026	49
CCTAGTT	15	0.008288142	50.180256	48
TCCTAGT	15	0.008288142	50.180256	47
CTAGTTT	15	0.008288142	50.180256	49
CGGATGA	15	0.008288142	50.180256	49
CACTAAA	15	0.008288142	50.180256	47
CTCAACG	85	0.0	50.126476	44
ATTCAAG	15	0.008323373	50.126472	33