SRR1526234_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526234_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	28169
Sequences flagged as poor quality	0
Sequence length	56
%GC	38

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CATGATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAG	145	0.5147502573751287	No Hit
CATGATGGGGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	67	0.23785011892505947	No Hit
CATGATGGGGGGAATTCGTGGAGAAAGAAATGGCTCGTCTGGCAGCATTTGATATG	42	0.14910007455003726	No Hit
CATGATGGGCAGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	40	0.1420000710000355	No Hit
CATGATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCCTGTCTCAAAGATTAAG	40	0.1420000710000355	No Hit
CATGATGGGAAGCAGTGGTATCAACGCAGAGTCGACTTTTTTTTTTTTTTTTTTTT	39	0.1384500692250346	No Hit
CATGATGGGGGGAATTCCTTCGATTCTGTTTTGCTACCCGTTGTAGCGCCGGAAGA	39	0.1384500692250346	No Hit
CATGATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAACGATTAAG	38	0.13490006745003372	No Hit
CATGATGGGGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	37	0.13135006567503285	No Hit
CATGATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTCGTCTCAAAGATTAAG	34	0.12070006035003018	No Hit
CATGATGGGAACGCAGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	31	0.11005005502502752	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TTGTAGC	15	0.008121855	50.344704	41
CCGTTGT	15	0.008121855	50.344704	38
CGTTGTA	15	0.008121855	50.344704	39
GTTGTAG	15	0.008121855	50.344704	40
TATGCTT	20	4.0475128E-4	50.16458	35
ATGCTTG	20	4.0475128E-4	50.16458	36
ATATGCT	20	4.0475128E-4	50.16458	34
TAGCGCC	15	0.008238047	50.164577	44
ACCCGTT	15	0.008238047	50.164577	36
GCTACCC	15	0.008238047	50.164577	33
CCCGTTG	15	0.008238047	50.164577	37
TGTAGCG	15	0.008238047	50.164577	42
TACCCGT	15	0.008238047	50.164577	35
AGCGCCG	15	0.008238047	50.164577	45
AGATTAA	25	1.9959843E-5	50.164577	49
CATATGC	25	1.9959843E-5	50.164577	33
CTACCCG	15	0.008238047	50.164577	34
TGCTACC	15	0.008296605	50.074997	32
GCATATG	25	2.0172936E-5	50.074997	32
CCAGTAG	30	1.0134299E-6	49.98574	26