SRR1526229_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526229_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	87955
Sequences flagged as poor quality	0
Sequence length	56
%GC	41

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACAATAGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAG	448	0.5093513728611222	No Hit
ACAATAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCC	172	0.19555454493775226	No Hit
ACAATAGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGC	142	0.16144619407651642	No Hit
ACAATAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCCCCCGACTGCTCTTCC	140	0.15917230401910068	No Hit
ACAATAGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTCGTCTCAAAGATTAAG	132	0.15007674378943778	No Hit
ACAATAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTC	128	0.14552896367460633	No Hit
ACAATAGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAACGATTAAG	111	0.12620089818657268	No Hit
ACAATAGGGGATCCCCTCGACCACTCCTTTGGCGCTTCGCTGTCGACCGTGCGCTT	107	0.12165311807174123	No Hit
ACAATAGGGTACCTGGTTGATCCTGCCAGTAGCATATGCCTGTCTCAAAGATTAAG	93	0.10573588766983116	No Hit
ACAATAGGGGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	93	0.10573588766983116	No Hit
ACAATAGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCGCGCA	92	0.1045989426411233	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GACCCTC	15	0.008058495	50.53522	38
ACATAGA	15	0.008076917	50.50606	40
GCCGCAT	20	3.960585E-4	50.506058	39
AAGACTA	15	0.008244129	50.24512	36
ATGCTCG	15	0.008244129	50.24512	36
TTAGAGC	15	0.008262866	50.216293	35
ATAGAAT	15	0.008262866	50.216293	42
CGTTGTG	15	0.008300435	50.15874	34
GTTAGAG	15	0.008300435	50.15874	34
ACGATTC	15	0.008319266	50.130013	48
ACCAAGC	15	0.008319266	50.130013	48
TTACCGA	15	0.008319266	50.130013	49
ACGATTA	25	2.0399368E-5	50.13001	48
AGCAAGG	15	0.00833813	50.10132	45
TACCGAA	15	0.008394912	50.01543	50
ATGCTAG	15	0.008413903	49.986866	15
ATTCAAG	15	0.008432926	49.958336	33
TCCCAAT	15	0.008432926	49.958336	33
TCGTTGT	20	4.1797527E-4	49.958332	33
TTCGTTG	20	4.1797527E-4	49.958332	32