SRR1526228_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526228_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	63994
Sequences flagged as poor quality	0
Sequence length	56
%GC	51

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AGCGAGGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAG	417	0.6516235897115354	No Hit
AGCGAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCC	167	0.26096196518423603	No Hit
AGCGAGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTC	122	0.19064287276932212	No Hit
AGCGAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCCCCCGACTGCTCTTCC	116	0.18126699378066694	No Hit
AGCGAGGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTCGTCTCAAAGATTAAG	114	0.17814170078444855	No Hit
AGCGAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGTTCTTCC	101	0.15782729630902897	No Hit
AGCGAGGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGC	99	0.1547020033128106	No Hit
AGCGAGGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAACGATTAAG	98	0.1531393568147014	No Hit
AGCGAGGGGTACCTGGTTGATCCTGCCAGTAGCATATGCCTGTCTCAAAGATTAAG	91	0.14220083132793698	No Hit
AGCGAGGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAGGGTG	91	0.14220083132793698	No Hit
AGCGAGGGGGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	89	0.1390755383317186	No Hit
AGCGAGGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGCCATG	81	0.12657436634684502	No Hit
AGCGAGGGGGACTTAAGCCAGCACTGCTGTGCGGGGCTCTGGCTGCGCCTGGTCTG	76	0.11876113385629902	No Hit
AGCGAGGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCGCGCA	69	0.10782260836953465	No Hit
AGCGAGGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTT	67	0.10469731537331625	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTGTCTC	15	0.008233233	50.246056	40
CGATTAA	20	4.0544177E-4	50.246056	49
ACGATTA	20	4.0544177E-4	50.246056	48
CAACGAT	20	4.0702432E-4	50.206463	46
AACGATT	20	4.0702432E-4	50.206463	47
GCTACTT	15	0.0082589565	50.206463	46
TCAACGA	20	4.0702432E-4	50.206463	45
TAGAAGG	15	0.00828474	50.166927	15
ATGGTTC	20	4.0861178E-4	50.166927	14
TGGGATC	15	0.00828474	50.166927	15
AAATGAG	15	0.00828474	50.166927	15
ACTACCT	15	0.0083105825	50.12746	13
CCGACTC	15	0.0083105825	50.12746	43
GCAGCTA	15	0.0083105825	50.12746	43
AGACTAC	15	0.008362449	50.048702	11
ATATGCC	25	2.0532589E-5	50.048702	34
AGAGTTA	15	0.008362449	50.048702	10
AAACATG	15	0.008362449	50.048702	10
GATTGTA	15	0.008362449	50.048702	10
GAGTTAT	15	0.008362449	50.048702	11