SRR1526225_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526225_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	54913
Sequences flagged as poor quality	0
Sequence length	56
%GC	55

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACGAGCGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAG	850	1.5479030466374084	No Hit
ACGAGCGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTCGTCTCAAAGATTAAG	262	0.4771183508458835	No Hit
ACGAGCGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCC	230	0.41884435379600454	No Hit
ACGAGCGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAACGATTAAG	229	0.41702329138819594	No Hit
ACGAGCGGGTACCTGGTTGATCCTGCCAGTAGCATATGCCTGTCTCAAAGATTAAG	214	0.38970735527106515	No Hit
ACGAGCGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCCCCCGACTGCTCTTCC	175	0.31868592136652524	No Hit
ACGAGCGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGC	173	0.3150437965509078	No Hit
ACGAGCGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTC	124	0.22581173856828074	No Hit
ACGAGCGGGCTCCTACTTGGATAACTGTGGTAATTCTAGAGCTAATACATGCCGAC	83	0.1511481798481234	No Hit
ACGAGCGGGGGGCCGATCGCACGCCCCCCGTGGCGGCGACGACCCATTCGAACGTC	76	0.1384007429934624	No Hit
ACGAGCGGGTACCTGGTTGATCCTGCCAGTAGCATATGCCCGTCTCAAAGATTAAG	67	0.12201118132318393	No Hit
ACGAGCGGGGGGCCGATCGCACGCCCCCCGTGGCGGCGACCACCCATTCGAACGTC	66	0.12019011891537523	No Hit
ACGAGCGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAACGATTCAG	56	0.10197949483728808	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGTCTCA	45	1.1641532E-10	50.60148	41
TCGTCTC	30	9.538635E-7	50.55463	40
TGCTCGT	30	9.72339E-7	50.41459	37
GTCGTCT	15	0.008178114	50.32166	43
CCAAAAC	25	1.9843206E-5	50.32166	43
TCGTCTT	15	0.008178114	50.32166	44
CGACTCC	25	1.9843206E-5	50.32166	44
CCGAATC	15	0.008178114	50.32166	43
ATGCTCG	30	9.911182E-7	50.275326	36
AGTTGTC	15	0.008207987	50.275326	42
GCGTTCA	15	0.008207987	50.275326	45
CGTTCAG	15	0.008237942	50.229073	46
GTTCAGC	15	0.008237942	50.229073	47
AACGATT	55	0.0	50.22907	47
TATGCCC	15	0.008267977	50.182907	35
ACGATTA	50	7.2759576E-12	50.182907	48
ATATGCC	50	7.2759576E-12	50.090828	34
TAGAGCG	35	5.0924427E-8	50.09082	34
ATCCCAT	15	0.008419379	49.953342	14
TGACACG	15	0.008419379	49.953342	14