SRR1526222_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526222_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	25230
Sequences flagged as poor quality	0
Sequence length	56
%GC	38

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TCAAAGGGGGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	95	0.3765358699960365	No Hit
TCAAAGGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAG	47	0.186286167261197	No Hit
TCAAAGGGGGGGCTCCTGTTTGAGCTGGTTATTGTTGCTCCTCTGAGGGTCCCTCT	43	0.17043202536662702	No Hit
TCAAAGGGGATTTCAACGCAGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTT	30	0.11890606420927466	No Hit
TCAAAGGGGGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	30	0.11890606420927466	No Hit
TCAAAGGGGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	28	0.1109789932619897	No Hit
TCAAAGGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGC	28	0.1109789932619897	No Hit
TCAAAGGGGGAGACCGCACTCGGACCTGCTCCGCTCCTGCACCGCGGCCAAGGAGA	26	0.10305192231470472	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TTCTCTG	15	0.008035555	50.464787	41
CCTTTTC	20	4.040234E-4	50.162003	43
GAGCACA	15	0.008229576	50.162	49
CACAGGA	15	0.008229576	50.162	44
AGGAGCA	15	0.008229576	50.162	47
TAGTAGC	15	0.008295018	50.061874	33
ATCACAG	15	0.008295018	50.061874	42
AGCACAG	15	0.008295018	50.061874	50
TCTCTGG	15	0.008295018	50.061874	42
AAGAGTG	20	4.1209243E-4	49.962154	10
ACAACGA	20	4.1209243E-4	49.962154	12
ACAGTGT	15	0.008360846	49.96215	10
ACAGTAG	15	0.008360846	49.96215	29
AGTAGTA	15	0.008360846	49.96215	31
AACTGGT	15	0.008360846	49.96215	10
CAGTAGT	15	0.008360846	49.96215	30
GAAGTGT	15	0.008360846	49.96215	9
GAACGCA	15	0.008360846	49.96215	9
AACCTGT	15	0.008360846	49.96215	10
ACCTGTC	15	0.008360846	49.96215	11