SRR1526219_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526219_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	69229
Sequences flagged as poor quality	0
Sequence length	56
%GC	49

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCGAATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAG	532	0.7684640829710093	No Hit
GCGAATGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGC	266	0.38423204148550466	No Hit
GCGAATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTCGTCTCAAAGATTAAG	143	0.20656083433243294	No Hit
GCGAATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCCTGTCTCAAAGATTAAG	133	0.19211602074275233	No Hit
GCGAATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAACGATTAAG	129	0.18633809530688009	No Hit
GCGAATGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCC	116	0.16755983764029525	No Hit
GCGAATGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTC	113	0.16322639356339108	No Hit
GCGAATGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCCCCCGACTGCTCTTCC	81	0.11700299007641306	No Hit
GCGAATGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCCCTTGCCTAGCAAGCGC	72	0.10400265784570051	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AGAACCT	15	0.008033691	50.563046	40
AACACCA	15	0.008033691	50.563046	39
GTTTAAT	15	0.0080570225	50.526005	41
ATGCTCG	40	2.4665496E-9	50.341606	36
TGCTCGT	40	2.4665496E-9	50.341606	37
TATGCCC	15	0.008174436	50.341602	35
ATATGCC	25	2.0024361E-5	50.268223	34
ATATGCT	135	0.0	50.26822	34
TGTGGGA	20	4.0771905E-4	50.195053	44
CTGACCG	15	0.008269279	50.19505	44
CGACTCC	15	0.008269279	50.19505	44
TACCAAG	15	0.008293117	50.158546	47
CAACGAT	25	2.0285222E-5	50.158546	46
CGTGCAA	30	1.0111162E-6	50.158546	48
CGATTAA	15	0.008293117	50.158546	49
ACGATTC	15	0.008293117	50.158546	48
AACGATT	25	2.0285222E-5	50.158546	47
CTACCAA	15	0.008293117	50.158546	46
ACGAGCC	15	0.008293117	50.158546	47
ACCGCTC	20	4.0918734E-4	50.158543	47