SRR1526215_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526215_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	11081
Sequences flagged as poor quality	0
Sequence length	56
%GC	55

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CATCCCGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGC	72	0.6497608519086725	No Hit
CATCCCGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAG	55	0.49634509520801373	No Hit
CATCCCGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCC	38	0.34292933850735496	No Hit
CATCCCGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTC	30	0.2707336882952802	No Hit
CATCCCGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCCCCCGACTGCTCTTCC	25	0.2256114069127335	No Hit
CATCCCGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCCCTTGCCTAGCAAGCGC	24	0.21658695063622416	No Hit
CATCCCGGGCTCCTACTTGGATAACTGTGGTAATTCTAGAGCTAATACATGCCGAC	22	0.19853803808320547	No Hit
CATCCCGGGGAGACTTGCTTCAGCATAGAGATAGAGGGAGCAGACGAAGCTACTCT	18	0.16244021297716812	No Hit
CATCCCGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTCGTCTCAAAGATTAAG	17	0.1534157567006588	No Hit
CATCCCGGGGAGACTTGCTTCAGCATAGAGATAGAGGGAGAAGACGAAGCTACTCT	17	0.1534157567006588	No Hit
CATCCCGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAACGATTAAG	17	0.1534157567006588	No Hit
CATCCCGGGGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	17	0.1534157567006588	No Hit
CATCCCGGGGAGTCCGAGTGGAGCGAGCGAGTCGAGCGGTTGTCTGGTCGCGTCTC	15	0.1353668441476401	No Hit
CATCCCGGGAAGCTTCACGCAGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTT	15	0.1353668441476401	No Hit
CATCCCGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGACTGCTCTTCC	12	0.10829347531811208	No Hit
CATCCCGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTACCAAGCGC	12	0.10829347531811208	No Hit
CATCCCGGGGGGCCGATCGCACGCCCCCCGTGGCGGCGACGACCCATTCGAACGTC	12	0.10829347531811208	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GAGCGCT	20	3.8487703E-4	50.399082	36
CGCTTGC	20	3.8487703E-4	50.399082	39
CTTGCCT	25	1.8635643E-5	50.399082	41
TAGAGCG	20	3.8487703E-4	50.399082	34
TGGTCTG	15	0.008102378	50.168953	50
GCAAGCG	15	0.008102378	50.168953	49
TAGCAAG	15	0.008102378	50.168953	47
CTGGTCT	15	0.008102378	50.168953	49
CTAGCAA	15	0.008102378	50.168953	46
AGCAAGC	15	0.008102378	50.168953	48
GCCTGGT	15	0.008102378	50.168953	47
CCTAGCA	15	0.008102378	50.168953	45
CCTGGTC	15	0.008102378	50.168953	48
GTAGAGC	20	3.937502E-4	50.16895	33
AGTAGCA	20	3.937502E-4	50.16895	28
CAGTAGC	20	3.937502E-4	50.16895	27
AGTGGTA	20	3.937502E-4	50.16895	29
TAGCATA	20	3.937502E-4	50.16895	30
AGCATAT	20	3.937502E-4	50.16895	31
GTGGTAG	20	3.937502E-4	50.16895	30