SRR1526214_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526214_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	20173
Sequences flagged as poor quality	0
Sequence length	56
%GC	39

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTGAGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGC	55	0.27264164972983695	No Hit
ACCTGAGGGGGGAATTCGTGGAGAAAGAAATGGCTCGTCTGGCAGCATTTGATATG	35	0.17349923164625985	No Hit
ACCTGAGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAG	33	0.16358498983790215	No Hit
ACCTGAGGGGGGAATTCCTTCGATTCTGTTTTGCTACCCGTTGTAGCGCCGGAAGA	33	0.16358498983790215	No Hit
ACCTGAGGGATGATACGAGAGTCGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	30	0.1487136271253656	No Hit
ACCTGAGGGGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	24	0.11897090170029247	No Hit
ACCTGAGGGGCCGAATAGCCTCTCCACCCAAGCGGCCGGAGAACCTGCGTGCAATC	23	0.11401378079611361	No Hit
ACCTGAGGGAAGCAGTGGTATCAACGCAGAGTCGACTTTTTTTTTTTTTTTTTTTT	23	0.11401378079611361	No Hit
ACCTGAGGGTGTTGTTGTTTTTGAGACATGATCTGGTGAGATCACAGGTCTGGCTA	21	0.10409953898775591	No Hit
ACCTGAGGGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	21	0.10409953898775591	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTTGCCT	20	3.9429928E-4	50.3593	41
CTTTTGA	15	0.0082409065	50.107502	30
TAGCGCC	20	4.042233E-4	50.107502	44
TTTTGCT	20	4.042233E-4	50.107502	29
TTTTGAT	15	0.0082409065	50.107502	31
ACAAAAC	30	9.820378E-7	50.107502	48
TGGTAGA	30	9.820378E-7	50.107502	31
CCAAAAC	20	4.042233E-4	50.107502	43
CATCTTT	15	0.0082409065	50.107502	27
TGTTTTG	20	4.042233E-4	50.107502	27
GATGTGG	15	0.0082409065	50.107502	14
GTTTTGC	20	4.042233E-4	50.107502	28
ATGTGGA	15	0.0082409065	50.107502	15
GCCGGAA	20	4.042233E-4	50.107502	48
GCGCCGG	20	4.042233E-4	50.107502	46
TGTAGCG	20	4.042233E-4	50.107502	42
CTTAATC	15	0.0082409065	50.107502	15
GTGGTAG	30	9.820378E-7	50.107502	30
AGCGCCG	20	4.042233E-4	50.107502	45
CTATGGC	15	0.0082409065	50.107502	32