SRR1526213_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526213_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	45493
Sequences flagged as poor quality	0
Sequence length	56
%GC	51

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TGCGGAGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAG	262	0.5759127777899896	No Hit
TGCGGAGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTCGTCTCAAAGATTAAG	91	0.20003077396522542	No Hit
TGCGGAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTC	86	0.18904007209900425	No Hit
TGCGGAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCC	81	0.17804937023278306	No Hit
TGCGGAGGGATGAGATGGACTTAAAGGAATTGACGGGTACGCACAGTTCTGAGTCG	80	0.17585122985953883	No Hit
TGCGGAGGGATGAGATGGACTTAAATGAATTGACGGGTACGCACAGTTCTGAGTCG	74	0.1626623876200734	No Hit
TGCGGAGGGTACCTGGTTGATCCTGCCAGTAGCATATGCCTGTCTCAAAGATTAAG	64	0.14068098388763106	No Hit
TGCGGAGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAACGATTAAG	61	0.13408656276789835	No Hit
TGCGGAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCCCCCGACTGCTCTTCC	60	0.13188842239465412	No Hit
TGCGGAGGGGAGGCATTCAGGCAGCGAGAGCAGAGCAGCGTAGAGCAGCACAGCTG	54	0.11869958015518871	No Hit
TGCGGAGGGGCAAGCTCCGTTGGGCGCCTTGGATCCATTTCCATCTGGTTCTGCTG	48	0.1055107379157233	No Hit
TGCGGAGGGGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	46	0.10111445716923483	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACGCCCA	15	0.008074136	50.47046	39
CCACTGA	15	0.008074136	50.47046	40
TCGTCTC	15	0.008074136	50.47046	40
AAGAGCC	35	4.8574293E-8	50.35818	35
TAAGACC	15	0.008145647	50.358173	35
ATGCTCG	15	0.008145647	50.358173	36
CAGCGTA	15	0.008145647	50.358173	36
AGCGTAG	15	0.008145647	50.358173	37
GTACGCC	15	0.008145647	50.358173	37
ATATGCC	25	1.9833864E-5	50.302223	34
GTAAGAC	15	0.0081815785	50.30222	34
TTGTTGG	15	0.008253796	50.19069	49
AACGATT	30	9.988726E-7	50.19069	47
CCGCTCT	15	0.008253796	50.19069	48
ACCGCTC	15	0.008253796	50.19069	47
GACCGCT	15	0.008253796	50.19069	46
TCTGAGT	80	0.0	50.19069	48
ACGATTC	15	0.008253796	50.19069	48
CAACGAT	30	9.988726E-7	50.19069	46
CGATTCA	15	0.008253796	50.19069	49