SRR1526211_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526211_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	69051
Sequences flagged as poor quality	0
Sequence length	56
%GC	52

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCGTCCGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAG	910	1.3178665044677123	No Hit
GCGTCCGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTCGTCTCAAAGATTAAG	251	0.3634994424410942	No Hit
GCGTCCGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAACGATTAAG	240	0.3475691879914845	No Hit
GCGTCCGGGTACCTGGTTGATCCTGCCAGTAGCATATGCCTGTCTCAAAGATTAAG	195	0.2823999652430812	No Hit
GCGTCCGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCC	173	0.2505394563438618	No Hit
GCGTCCGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTC	164	0.23750561179418112	No Hit
GCGTCCGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCCCCCGACTGCTCTTCC	148	0.2143343325947488	No Hit
GCGTCCGGGAAGCAGTGGTATCAACGCAGAGTCGACTTTTTTTTTTTTTTTTTTTT	73	0.10571896134740988	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCCTGTC	30	9.811174E-7	50.37729	38
TGCCCGT	15	0.008175101	50.340412	37
ACTGTGC	15	0.008175101	50.340412	41
TATGCTT	205	0.0	50.266815	35
CGATTCA	25	2.0027068E-5	50.26681	49
CGATTAA	40	2.4992914E-9	50.26681	49
TATGCCT	30	9.961168E-7	50.26681	35
TATGCCC	15	0.008222564	50.26681	35
ACGATTC	25	2.0113976E-5	50.230095	48
ACGATTA	40	2.5156623E-9	50.230095	48
AACGATT	60	0.0	50.230095	47
AAGATTA	240	0.0	50.230095	48
ATATGCC	55	0.0	50.156822	34
ATATGCT	280	0.0	50.15682	34
AATGAGG	15	0.008318105	50.120262	43
ATGAGGT	15	0.008318105	50.120262	44
ATAAACA	15	0.008318105	50.120262	50
GATTCAG	25	2.037658E-5	50.120262	50
TAATGAG	15	0.008342118	50.08376	42
GGATAAG	15	0.0083903	50.01091	32