SRR1526206_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526206_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	82206
Sequences flagged as poor quality	0
Sequence length	56
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TAGAGAGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAG	1035	1.2590321874315742	No Hit
TAGAGAGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTCGTCTCAAAGATTAAG	307	0.37345205946038	No Hit
TAGAGAGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAACGATTAAG	276	0.33574191664841985	No Hit
TAGAGAGGGTACCTGGTTGATCCTGCCAGTAGCATATGCCTGTCTCAAAGATTAAG	260	0.3162786171325694	No Hit
TAGAGAGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGC	143	0.1739532394229132	No Hit
TAGAGAGGGGAGGCATTCAGGCAGCGAGAGCAGAGCAGCGTAGAGCAGCACAGCTG	98	0.11921270953458385	No Hit
TAGAGAGGGATGAGATGGACTTAAATGAATTGACGGGTACGCACAGTTCTGAGTCG	94	0.11434688465562125	No Hit
TAGAGAGGGATGAGATGGACTTAAAGGAATTGACGGGTACGCACAGTTCTGAGTCG	87	0.10583169111743668	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCTGTAC	15	0.0080547	50.538273	38
GCGTAGA	25	1.9431147E-5	50.538273	38
GCCTGTC	55	0.0	50.53827	38
CTGTACC	15	0.008074388	50.507095	39
AGCGTAG	30	9.702544E-7	50.475956	37
TGCTCGT	55	0.0	50.475956	37
TAAAGGC	15	0.008213215	50.289925	34
CGATTCA	20	4.1055508E-4	50.13595	49
ACGATTC	20	4.1055508E-4	50.13595	48
CGATTAA	25	2.0373354E-5	50.135944	49
ACGATTA	25	2.0373354E-5	50.135944	48
CAACGAT	40	2.581146E-9	50.105263	46
TCGCACT	15	0.008353808	50.07462	42
ACCCGAC	15	0.008353808	50.07462	42
GGTCCTA	15	0.0084146075	49.982906	50
GATTCAG	30	1.0383337E-6	49.982906	50
CTTAATC	30	1.0427211E-6	49.95241	15
GACAGTC	15	0.008434947	49.95241	9
GATGTAC	15	0.008434947	49.95241	9
GCATTAT	30	1.0427211E-6	49.95241	12