SRR1526205_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526205_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	44450
Sequences flagged as poor quality	0
Sequence length	56
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CCAGACGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAG	165	0.3712035995500562	No Hit
CCAGACGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCC	86	0.19347581552305962	No Hit
CCAGACGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTC	81	0.18222722159730034	No Hit
CCAGACGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCCCCCGACTGCTCTTCC	65	0.14623172103487064	No Hit
CCAGACGGGGCAAGCTCCGTTGGGCGCCTTGGATCCATTTCCATCTGGTTCTGCTG	64	0.14398200224971877	No Hit
CCAGACGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGC	55	0.12373453318335209	No Hit
CCAGACGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAACGATTAAG	49	0.11023622047244094	No Hit
CCAGACGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTCGTCTCAAAGATTAAG	49	0.11023622047244094	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TTTCCAT	15	0.008080579	50.45838	38
GCTTGTC	45	1.1823431E-10	50.45838	38
GCATGAG	15	0.008080579	50.45838	40
CTTGTCT	45	1.1823431E-10	50.45838	39
CGTTGTA	20	3.9574096E-4	50.45838	39
GTTGTAG	20	3.9574096E-4	50.45838	40
TGCTTGT	45	1.200533E-10	50.400913	37
TATGCTT	50	5.456968E-12	50.229286	35
ATGCTTG	55	0.0	50.229286	36
GCCTTGT	15	0.008227488	50.229282	45
AACGATT	15	0.008227488	50.229282	47
TCAAAGA	40	2.4792826E-9	50.229282	45
AAGATTA	40	2.4792826E-9	50.229282	48
CGCAGGC	15	0.008227488	50.229282	35
CAAAGAT	40	2.4792826E-9	50.229282	46
CCCCCTG	15	0.008227488	50.229282	49
AGATTAA	40	2.4792826E-9	50.229282	49
AAAGATT	40	2.4792826E-9	50.229282	47
CCAAAAC	15	0.008264524	50.172337	43
GATTAAG	50	5.456968E-12	50.172337	50