SRR1526204_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526204_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	61736
Sequences flagged as poor quality	0
Sequence length	56
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAGGAGGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAG	1232	1.9955941428016069	No Hit
GAGGAGGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAACGATTAAG	370	0.5993261630167164	No Hit
GAGGAGGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTCGTCTCAAAGATTAAG	328	0.5312945445121161	No Hit
GAGGAGGGGTACCTGGTTGATCCTGCCAGTAGCATATGCCTGTCTCAAAGATTAAG	279	0.4519243229234159	No Hit
GAGGAGGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAACGATTCAG	95	0.15388104185564339	No Hit
GAGGAGGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCCAAGATTAAG	79	0.12796423480627186	No Hit
GAGGAGGGGCTCCTACTTGGATAACTGTGGTAATTCTAGAGCTAATACATGCCGAC	77	0.12472463392510043	No Hit
GAGGAGGGGACACGCAGGGATGAGATGGCCAAAAAAAAAAAAAAAAAAAAAAAAAA	76	0.1231048334845147	No Hit
GAGGAGGGGGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	70	0.1133860308410004	No Hit
GAGGAGGGGACACGCAGGGATGAGATGGCCAAAAAAAAAACAAAAAAAAAAAAAAA	70	0.1133860308410004	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCTAGTC	20	3.9804744E-4	50.43057	38
AAACACC	15	0.00811325	50.43057	38
GTCTGGC	15	0.008139665	50.389164	37
ATGCCTG	25	1.990798E-5	50.306557	36
ATGCCCG	15	0.008192686	50.306557	36
TATGCTA	20	4.0455523E-4	50.265358	35
GTGAAGG	15	0.008219292	50.265358	34
CTACCCG	15	0.008219292	50.265358	34
TGCCAAG	15	0.008245964	50.224224	47
CAACGAT	55	0.0	50.224224	46
AACGATT	50	7.2759576E-12	50.22422	47
ACGATTA	50	7.2759576E-12	50.22422	48
CGATTAA	50	7.2759576E-12	50.22422	49
TAGCGCC	15	0.008272699	50.183155	44
CCAAAAC	35	5.032598E-8	50.183155	43
CACAATT	15	0.008353292	50.06036	42
GCAGCAT	30	1.0230287E-6	50.06036	42
TGTAGCG	15	0.008353292	50.06036	42
TTCGGCG	15	0.008353292	50.06036	33
TGCTACC	15	0.008407344	49.97883	32