SRR1526201_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526201_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	13393
Sequences flagged as poor quality	0
Sequence length	56
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Duplication level graph

Sequence	Count	Percentage	Possible Source
TGTCACGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAG	159	1.187187336668409	No Hit
TGTCACGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTCGTCTCAAAGATTAAG	39	0.2911968938997984	No Hit
TGTCACGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAACGATTAAG	33	0.2463973717613679	No Hit
TGTCACGGGGGATACAGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	32	0.23893078473829613	No Hit
TGTCACGGGTACCTGGTTGATCCTGCCAGTAGCATATGCCTGTCTCAAAGATTAAG	31	0.23146419771522436	No Hit
TGTCACGGGGGGAATTCCTTCGATTCTGTTTTGCTACCCGTTGTAGCGCCGGAAGA	15	0.11199880534607631	No Hit
TGTCACGGGGGGAATTCGTGGAGAAAGAAATGGCTCGTCTGGCAGCATTTGATATG	15	0.11199880534607631	No Hit
TGTCACGGGAAGCATGTATCACGCAGAGTCGACTTTTTTTTTTTTTTTTTTTTTTT	14	0.10453221832300455	No Hit
TGTCACGGGATGTCAGAGTCGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	14	0.10453221832300455	No Hit
TGTCACGGGATGGAAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	14	0.10453221832300455	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATGCTTG	30	8.996558E-7	50.55133	36
TTGTCTC	30	9.237956E-7	50.359848	40
TATGCTT	30	9.237956E-7	50.359848	35
CTTGTCT	30	9.237956E-7	50.359848	39
AACGATT	15	0.008139607	50.16981	47
TCAAAGA	30	9.4848656E-7	50.16981	45
AAGATTA	30	9.4848656E-7	50.16981	48
CTTGTCC	15	0.008139607	50.16981	49
ACGATTA	15	0.008139607	50.16981	48
AGATTAA	30	9.4848656E-7	50.16981	49
AAAGATT	30	9.4848656E-7	50.16981	47
CGTCTCA	15	0.008139607	50.16981	41
ATATGCT	35	4.6517016E-8	50.169807	34
AGTAGCA	35	4.7935828E-8	49.981205	28
GGGTAAG	15	0.008262387	49.981205	32
GCCAGTA	40	2.3628672E-9	49.981205	25
TGCCAGT	40	2.3628672E-9	49.981205	24
CAAAGAT	30	9.737378E-7	49.981205	46
AAGTGGT	15	0.008262387	49.981205	10
TCTCAAC	15	0.008262387	49.981205	43