SRR1526199_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526199_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	21944
Sequences flagged as poor quality	0
Sequence length	56
%GC	50

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTGGCGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAG	281	1.2805322639445862	No Hit
CGTGGCGGGTACCTGGTTGATCCTGCCAGTAGCATATGCCTGTCTCAAAGATTAAG	74	0.3372220196864747	No Hit
CGTGGCGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTCGTCTCAAAGATTAAG	61	0.27798031352533725	No Hit
CGTGGCGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAACGATTAAG	53	0.24152387896463728	No Hit
CGTGGCGGGTACCTGGTTGATCCTGCCAGTAGCATATGCCCGTCTCAAAGATTAAG	43	0.19595333576376228	No Hit
CGTGGCGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGC	31	0.14126868392271236	No Hit
CGTGGCGGGCTCCTACTTGGATAACTGTGGTAATTCTAGAGCTAATACATGCCGAC	29	0.13215457528253735	No Hit
CGTGGCGGGGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	27	0.12304046664236237	No Hit
CGTGGCGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCC	23	0.1048122493620124	No Hit
CGTGGCGGGGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	23	0.1048122493620124	No Hit
CGTGGCGGGGACACGCAGGGATGAGATGGGGAAAAAAAAACAAAAAAAAAAAAAAA	22	0.10025519504192489	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGTCTCA	20	3.88183E-4	50.538284	41
TGCCTAG	15	0.007975094	50.53828	43
TCTCAAC	25	1.895472E-5	50.53828	43
ACAAAAC	15	0.008048742	50.421295	48
AACGATT	25	1.9217912E-5	50.421295	47
ACGATTA	15	0.008048742	50.421295	48
AGCAAGC	15	0.008048742	50.421295	48
CCTAGCA	15	0.008048742	50.421295	45
TTGCCTA	15	0.008048742	50.421295	42
CGATTAA	15	0.008048742	50.421295	49
GATTCAG	20	4.0637256E-4	50.073563	50
ATATGCT	75	0.0	49.958717	34
TGGTTGA	95	0.0	49.958714	14
GGTTGAT	95	0.0	49.958714	15
TATGCTT	65	0.0	49.958714	35
TTGGGGA	15	0.008348406	49.958714	14
ATGCTTG	65	0.0	49.958714	36
ATATGCC	15	0.008348406	49.958714	34
ATCCTGC	95	0.0	49.844395	20
GTTGATC	95	0.0	49.844395	16