SRR1526196_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526196_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	87509
Sequences flagged as poor quality	0
Sequence length	56
%GC	53

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CCGACGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCC	268	0.30625421385228946	No Hit
CCGACGGGGGGGCTGGAGAGATGGCTCAGCCGTTAAAGGCTAGGCTCACAACCAAA	258	0.29482681781302494	No Hit
CCGACGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCCCCCGACTGCTCTTCC	222	0.25368819207167265	No Hit
CCGACGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTC	176	0.2011221702910558	No Hit
CCGACGGGGGGGCTGGAGAGATGGCTCAGCCGTTAAAGGCCAGGCTCACAACCAAA	124	0.14169971088688021	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CCCCGAC	55	0.0	50.263676	41
GTTAAAC	20	4.055773E-4	50.26367	40
ATAACCT	15	0.008232031	50.26367	40
GAGTACG	15	0.008269589	50.205864	36
AAGGCCA	25	2.021706E-5	50.205864	36
AAAGGCC	25	2.028602E-5	50.177013	35
TACCAAG	15	0.008307275	50.14819	47
CGTGCAA	20	4.1021162E-4	50.14819	48
CAACCGT	15	0.008307275	50.14819	49
TTAAGAC	25	2.0355175E-5	50.14819	34
CTACCAA	15	0.008307275	50.14819	46
CCAAAAC	20	4.1254453E-4	50.09065	43
TTAATGT	15	0.008345089	50.090645	43
GTACTAA	15	0.008345089	50.090645	43
ACAGGAT	20	4.137149E-4	50.061928	33
CGACCGG	15	0.008364043	50.061924	33
ATGATCA	15	0.0084211	49.975956	13
AAGAGTG	20	4.172419E-4	49.975956	10
ATAGCCT	15	0.0084211	49.975956	15
GTTAGGA	15	0.0084211	49.975956	32