SRR1526195_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526195_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	75738
Sequences flagged as poor quality	0
Sequence length	56
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCTTGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAG	798	1.053632258575616	No Hit
GATCTTGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAACGATTAAG	197	0.26010721170350415	No Hit
GATCTTGGGTACCTGGTTGATCCTGCCAGTAGCATATGCCTGTCTCAAAGATTAAG	178	0.2350207293564657	No Hit
GATCTTGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTCGTCTCAAAGATTAAG	170	0.22445799994718635	No Hit
GATCTTGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTC	104	0.13731548232063165	No Hit
GATCTTGGGAAGCAGTGGTATCAACGCAGAGTCGACTTTTTTTTTTTTTTTTTTTT	101	0.13335445879215188	No Hit
GATCTTGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAAAAAAAAAAAAAA	88	0.11619002350207294	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCTACAG	15	0.00826824	50.2012	44
GCGCCCG	15	0.00826824	50.2012	44
CGATTCA	20	4.090596E-4	50.167778	49
CGATTAA	20	4.090596E-4	50.167778	49
CCACTAT	15	0.008290054	50.167774	42
AACGATT	35	5.0924427E-8	50.134396	47
TGATATG	20	4.1040682E-4	50.134396	50
ATTTGAT	20	4.1040682E-4	50.134396	47
CTTCGGG	15	0.008311912	50.134396	47
ACGATTC	20	4.1040682E-4	50.134396	48
ACGATTA	20	4.1040682E-4	50.134396	48
CAACGAT	35	5.0924427E-8	50.134396	46
ATTCGTG	20	4.117576E-4	50.101067	14
TTCGTGG	25	2.0441803E-5	50.101063	15
AACGAAG	15	0.0083338125	50.101063	14
CAAGGAC	15	0.0083338125	50.101063	33
GTAGTGG	15	0.0083338125	50.101063	14
CCAGTGA	15	0.008399771	50.001328	13
AATTCGT	20	4.1583105E-4	50.001328	13
GTGACAG	15	0.008421843	49.968166	16