SRR1526192_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526192_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	60793
Sequences flagged as poor quality	0
Sequence length	56
%GC	36

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AATAAAGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAG	388	0.6382313753228168	No Hit
AATAAAGGGATGAGATGGACTTAAAGGAATTGACGGGTACGCACAGTTCTGAGTCG	145	0.23851430263352688	No Hit
AATAAAGGGATGAGATGGACTTAAATGAATTGACGGGTACGCACAGTTCTGAGTCG	141	0.23193459773329164	No Hit
AATAAAGGGGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	127	0.2089056305824684	No Hit
AATAAAGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTCGTCTCAAAGATTAAG	102	0.16778247495599824	No Hit
AATAAAGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAACGATTAAG	96	0.15791291760564538	No Hit
AATAAAGGGATGAGATGGACTCAAAGGAATTGACGGGTACGCACAGTTCTGAGTCG	95	0.15626799138058659	No Hit
AATAAAGGGTACCTGGTTGATCCTGCCAGTAGCATATGCCTGTCTCAAAGATTAAG	82	0.1348839504548221	No Hit
AATAAAGGGATGAGATGGACTCAAATGAATTGACGGGTACGCACAGTTCTGAGTCG	69	0.11349990952905763	No Hit
AATAAAGGGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	68	0.1118549833039988	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACGCCCA	15	0.008092427	50.4625	39
GCGAACC	15	0.008092427	50.4625	39
TACGCCC	15	0.008092427	50.4625	38
CGAATTG	15	0.008092427	50.4625	41
CGAACCT	15	0.008092427	50.4625	40
GGCCGCC	20	3.9676134E-4	50.462498	38
TACCCAC	25	1.9542922E-5	50.462498	38
CGGCGAA	15	0.00822669	50.253117	37
CGGCCGC	20	4.0499913E-4	50.25311	37
CCCAGTT	15	0.008253739	50.211445	42
TGTAGCG	15	0.008253739	50.211445	42
ACTCAAC	15	0.008335288	50.086853	34
TGCGCTG	15	0.008389984	50.00413	11
GTCGCTA	15	0.008389984	50.00413	13
CCGCCCG	15	0.008389984	50.00413	15
ATGCGCT	15	0.008389984	50.00413	10
CGCTAGG	15	0.008389984	50.00413	15
TCGCTAG	15	0.008389984	50.00413	14
ATGTTAA	15	0.008389984	50.00413	10
AAGCCGT	15	0.008389984	50.00413	10