SRR1526185_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526185_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	43608
Sequences flagged as poor quality	0
Sequence length	56
%GC	35

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGTTTGGGAAGCAGTGGTATCAACGCAGAGTCGACTTTTTTTTTTTTTTTTTTTT	190	0.4356998715831957	No Hit
GGGTTTGGGGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	111	0.2545404512933407	No Hit
GGGTTTGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	77	0.17657310585213723	No Hit
GGGTTTGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAAAAAAAAAAAAAA	63	0.14446890478811228	No Hit
GGGTTTGGGGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	62	0.14217574756925333	No Hit
GGGTTTGGGAAGCAGTGGTATCAACGCAGAGTCGACTTTTCTTTTTTTTTTTTTTT	58	0.13300311869381765	No Hit
GGGTTTGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	53	0.12153733259952303	No Hit
GGGTTTGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCAAAAAAAAAAAAAAA	51	0.11695101816180517	No Hit
GGGTTTGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAAAAAAAAAAAAAA	48	0.1100715465052284	No Hit
GGGTTTGGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	47	0.10777838928636947	No Hit
GGGTTTGGGGCCGAATAGCCTCTCCACCCAAGCGGCCGGAGAACCTGCGTGCAATC	45	0.10319207484865162	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AAACACC	15	0.008168009	50.319817	38
CCGTCTC	15	0.008168009	50.319817	35
TCTCCTG	15	0.008168009	50.319817	38
AAAAACT	15	0.008168009	50.319817	35
CCTGCTT	15	0.008205547	50.261578	41
CTCCTGC	15	0.008205547	50.261578	39
AGAACCT	15	0.008205547	50.261578	39
TCCTGCT	15	0.008205547	50.261578	40
AACACCA	15	0.008205547	50.261578	39
AACCAAC	20	4.0337906E-4	50.261574	41
CCAACAC	25	2.0052647E-5	50.20347	43
CCAAAAC	60	0.0	50.20347	43
TGATATG	15	0.008318932	50.08766	50
GCAATCC	15	0.008318932	50.08766	50
AATAGCC	15	0.008318932	50.08766	14
AATGGTA	35	5.1088136E-8	50.029957	10
AGCATGT	55	0.0	50.029957	11
GAGCGCA	15	0.008356985	50.029953	11
AACTGTA	15	0.008356985	50.029953	10
AAGAGTG	15	0.008356985	50.029953	10