SRR1526181_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526181_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	19678
Sequences flagged as poor quality	0
Sequence length	56
%GC	55

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCCCTCGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCC	87	0.44211810143307245	No Hit
GCCCTCGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTC	76	0.386218111596707	No Hit
GCCCTCGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCCCCCGACTGCTCTTCC	65	0.3303181217603415	No Hit
GCCCTCGGGGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	43	0.21851814208761053	No Hit
GCCCTCGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGC	43	0.21851814208761053	No Hit
GCCCTCGGGGGGCTGGAGAGATGGCTCAGCCGTTAAAGGCTAGGCTCACAACCAAA	41	0.20835450757190774	No Hit
GCCCTCGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGACCACCCGACTGCTCTTC	27	0.137209065961988	No Hit
GCCCTCGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCGCGCA	26	0.1321272487041366	No Hit
GCCCTCGGGGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGCTCTTCC	25	0.1270454314462852	No Hit
GCCCTCGGGGACTTAAGCCAGCACTGCTGTGCGGGGCTCTGGCTGCGCCTGGTCTG	23	0.11688179693058237	No Hit
GCCCTCGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGCCATG	21	0.10671816241487955	No Hit
GCCCTCGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCTGACTGCTCTTCC	20	0.10163634515702816	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGGAGAA	15	0.008147609	50.246788	37
CGCCACC	15	0.008147609	50.246788	27
AGAACCT	15	0.008147609	50.246788	40
CCACTGA	15	0.008147609	50.246788	40
CCCAAGC	20	3.9844945E-4	50.246788	27
CCCCGAC	20	3.9844945E-4	50.246788	41
CCCTGAC	15	0.008147609	50.246788	40
ACCCAAG	20	3.9844945E-4	50.246788	26
CCCCCGA	20	3.9844945E-4	50.246788	40
GCCGTTA	15	0.008147609	50.246788	29
AGCCGTT	15	0.008147609	50.246788	28
AGACCAC	20	3.9844945E-4	50.246788	37
CAAGCGG	20	3.9844945E-4	50.246788	29
GGTTGGA	15	0.008231033	50.11795	32
GTGCAAT	15	0.008231033	50.11795	49
CGTTAAA	15	0.008231033	50.11795	31
TGCAATC	20	4.0355543E-4	50.11795	50
TGCGTGC	15	0.008231033	50.11795	46
TAAGACC	20	4.0355543E-4	50.11795	35
AACCTGC	20	4.0355543E-4	50.11795	42