SRR1526117_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526117_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	10191
Sequences flagged as poor quality	0
Sequence length	40
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TATTGTGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGC	22	0.21587675399862624	No Hit
TATTGTGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCG	17	0.16681385536257481	No Hit
TATTGTGGGCTCGTCTTAATCAGCAACATCTTTTGATACA	15	0.14718869590815425	No Hit
TATTGTGGGGAGTCGACTTTTTTTTTTTTTTTTTTTTTTT	14	0.13737611618094397	No Hit
TATTGTGGGGATCCCCTCGACCACTCCTTTGGCGCTTCGC	14	0.13737611618094397	No Hit
TATTGTGGGCTCGTCTTAATCCGCAACATCTTTTGATACA	13	0.1275635364537337	No Hit
TATTGTGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAG	13	0.1275635364537337	No Hit
TATTGTGGGGTCGACTTTTTTTTTTTTTTTTTTTTTTTTT	12	0.11775095672652341	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TGGGGTT	20	0.0027149783	33.862072	6
TGGGGTC	20	0.0027149783	33.862072	6
TGGGGGC	20	0.0027149783	33.862072	6
TGGGGGA	40	7.05877E-8	33.862072	6
TGGGGAC	20	0.0027149783	33.862072	6
GTGGGCA	40	7.05877E-8	33.862072	5
TGGGCAG	20	0.0027149783	33.862072	6
TGGGACA	20	0.0027149783	33.862072	6
TTGTGGC	20	0.0027149783	33.862072	3
TGGGGCC	25	1.9362103E-4	33.86207	6
GTGGGGC	60	1.8189894E-12	33.86207	5
GTGGGCG	25	1.9362103E-4	33.86207	5
GTGGGAC	45	5.0404196E-9	33.86207	5
GGGATGG	25	1.9362103E-4	33.86207	7
TGGGTGG	25	1.9362103E-4	33.86207	6
TGGGATG	30	1.3825498E-5	33.86207	6
TGGGAGC	30	1.3825498E-5	33.86207	6
TGGGAAC	30	1.3825498E-5	33.86207	6
GTGGGGG	165	0.0	32.835945	5
TGGGGGG	90	0.0	31.980843	6