SRR1526090_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1526090_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	23277
Sequences flagged as poor quality	0
Sequence length	56
%GC	53

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ATTTGCGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAG	132	0.5670833870344116	No Hit
ATTTGCGGGTCACAGATCCTCTTCTGAGATGAGTTTTTGTTCAATCCGCCCAATCT	106	0.4553851441336942	No Hit
ATTTGCGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCC	103	0.44249688533745757	No Hit
ATTTGCGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTC	87	0.3737595050908622	No Hit
ATTTGCGGGTCACAGATCCTCTTCTGAAGGAGATTGGGCGGATTGAACAAAAACTC	71	0.3050221248442669	No Hit
ATTTGCGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCCCCCGACTGCTCTTCC	45	0.1933238819435494	No Hit
ATTTGCGGGGGGCGCTGACCCCCCTTCCCGGGGGGGGATGCGTGCATTTATCAGAT	42	0.1804356231473128	No Hit
ATTTGCGGGGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGCTCTTCC	39	0.16754736435107617	No Hit
ATTTGCGGGACTAATCCTAGCCCTAGCCCTACACAAATATAATTATACTATTATAT	29	0.12458650169695407	No Hit
ATTTGCGGGTCACAGATCCTCTTCTGAAGGAGATTGGGCGCATTGAACAAAAACTC	28	0.12029041543154186	No Hit
ATTTGCGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGTTCTTCC	26	0.11169824290071745	No Hit
ATTTGCGGGGATCCCCTCGACCACTCTTTTGGCGCTTCGCTGTCGACAGTGCGCTT	26	0.11169824290071745	No Hit
ATTTGCGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTCGTCTCAAAGATTAAG	24	0.10310607036989304	No Hit
ATTTGCGGGGCTCTTTTCCTCTGGCGCGCCACCGACGATCCTATTGTCATCATGGG	24	0.10310607036989304	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TATAATT	15	0.0077820863	50.860928	38
GTTCAAT	35	4.3597538E-8	50.860928	39
ATAATTA	15	0.0077820863	50.860928	39
TTGTTCA	40	2.224624E-9	50.63736	37
TTTGTTC	40	2.2682798E-9	50.526318	36
TTTTGTC	15	0.0079884995	50.526314	35
TGAGAAC	15	0.0079884995	50.526314	35
AAATATA	15	0.0079884995	50.526314	35
AAGAGAC	15	0.0079884995	50.526314	35
TTTTGTT	45	1.1277734E-10	50.526314	35
CGCCCAA	40	2.3137545E-9	50.415752	47
CCGCCCA	25	1.9266045E-5	50.415752	46
TCCGCCC	30	9.47397E-7	50.415752	45
GCCCAAT	45	1.1641532E-10	50.30568	48
CCCAATC	45	1.1641532E-10	50.30568	49
ACCGACT	15	0.008128352	50.305676	42
CGACTCC	15	0.008198958	50.196075	44
CCAATCT	45	1.2187229E-10	50.086956	50
TGGGGAT	15	0.008270019	50.086956	15
CCGACTC	15	0.008270019	50.086956	43